CF835861

Overview
NameCF835861
Unique NameCF835861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: PECR_PONAB (Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo abelii GN=PECR PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 60/193 (31.09%), Postives = 93/193 (48.19%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK-----SKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNI--IFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWII 697
            L+G  A+VTGG  GIG AIV+EL   G+ V   SR    L     E +     +K  +V    C+++   E   L+++    F GK+N LVNN G      A   + + +  ++ TN    +++ +  Y        G+I  I +S  TG   +PL     + +  +  LTK+LA EW    +R+N VAP +I
Sbjct:   16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAGELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDIF-GKINFLVNNGGGQFLSLAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVSIKTG---LPLAVHSGAARAGVYNLTKSLALEWACSGVRINCVAPGVI 204          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: MTDH_UROFA (Probable NADP-dependent mannitol dehydrogenase OS=Uromyces fabae GN=PIG8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 59/193 (30.57%), Postives = 101/193 (52.33%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG--NGNIIFISSVTGVIAV-PLCS-IYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRT 703
            LK    +VTGG RGIG A+ +     GA V     +  +  +R  E   K G+K     CD+  + + +++ + +  E  G +  L+ NAG ++ KEA ++  +DF+ I   N    ++ +Q    +   +G   G+++ ISS++  I   PL    Y S+K A++ L K LA EW + +IRVN ++P  ++T
Sbjct:    7 LKDQCIIVTGGNRGIGLAMSQACADAGAAVGIIYNSAKDAEDRASEISKKYGVKCKAYQCDVGQQHKVKEVFKKINEEL-GPVTGLIANAGVSVVKEALQYNKDDFNKIFDVNVFGVFNCAQAMAQIWTDTGFQRGSVVIISSMSSQICNRPLTQCFYNSSKAAVSNLGKCLAAEWAEKSIRVNMLSPGYVKT 198          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 58/192 (30.21%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAI-VEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L+G   ++TG + G+G A+ +   T    +V      E E N  ++E K  G +      D+ + ++   L+++   EF GKL++++NNAG   P  + E ++ D++ ++ TN   A+  S+ A      +   G +I +SSV   I  PL   YA++KG M  +T+ LA E+    IRVN + P  I T +
Sbjct:    5 LEGKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSSIKEF-GKLDVMINNAGMENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 64/191 (33.51%), Postives = 95/191 (49.74%), Query Frame = 2
Query:  152 TALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWK--SKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLID 715
            TA++TG T GIG AI   L   GA IV        E+     E    S G  +   A D+   +E   +M  V   F G  +ILVNNAG    ++  +F +E +  I+  N  S++H  + A P +K  G G II I+S  G++A P  S Y + K  +  LTK +A E  +  + VN++ P  + T L++
Sbjct:    4 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA-DMTKPSEIADMMAMVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE 192          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 63/193 (32.64%), Postives = 102/193 (52.85%), Query Frame = 2
Query:  134 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQ-LAYPLLKASGNGNIIFISSVTGVI-AVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTS 706
            ++L+G  AL+TG   G+G  +   L   G  +     N  E  E I++  + G +      D+   +    L+E   +EF GK++ILVNNAG    ++A EF+ +++  +M  N +S + +SQ +A   +K    G II I+S+      +P+ S  AS K  M  +T+ +A EW K NI VNA+AP  + T+
Sbjct:    6 FNLQGKVALITGCDTGLGQGMAVGLAEAGCDI--VGVNIVEPKETIEKVTAVGRRFLSLTADMSDISGHAALVEKAVAEF-GKVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPSYTASKKRVMG-ITRIVANEWAKHNINVNAIAPGYMATN 194          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 57/192 (29.69%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAI-VEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L+G   ++TG + G+G ++ +   T    +V      E E N  ++E K  G +      D+ + ++   L+++   EF GKL++++NNAG   P  + E ++ D++ ++ TN   A+  S+ A      +   G +I +SSV   I  PL   YA++KG M  +T+ LA E+    IRVN + P  I T +
Sbjct:    5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 65/193 (33.68%), Postives = 95/193 (49.22%), Query Frame = 2
Query:  146 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTM-EDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721
            G   +VTGG RGIG  IV      GA V  C ++E+      QE       +    CD+    + + L+      F G+L+ +VNNAG   P +  E T  + F  ++  N    Y L++LA P L+ S  GN+I ISS+ G I       Y +TKGA+  +TK LA +     +RVN ++P  I T L + +
Sbjct:    9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL----CDVTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 2
Query:  146 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTM-EDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721
            G   +VTGG RGIG  IV      GA V  C ++E     R  E +  G       CD+    + + L+      F G+L+ +VNNAG   P +  E T  + F  ++  N    Y L++LA P L+ S  GN+I ISS+ G I       Y +TKGA+  +TK LA +  +  +RVN ++P  I T L + +
Sbjct:    9 GKVVIVTGGGRGIGAGIVRAFVESGAQVVICDKDEAR--GRAVERELPGTVFL--LCDVTREEDVRTLVSETIRRF-GRLDCIVNNAGYHPPPQWPEETSAQGFRQLLELNLLGTYTLTKLALPHLRKS-RGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPLWEEL 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 56/193 (29.02%), Postives = 94/193 (48.70%), Query Frame = 2
Query:  152 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTN-FESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            TA++TG   G+G  I E L   G  +     NE  L E  +E+K KG +      D+  + E+++L++   +EF G+L+++VNNAG        E   E+ S +   N F + + +   A   +K    G II   S+ G  +  +   Y++TK ++   T+  A E     I VNA  P + +T + D I++
Sbjct:    4 TAIITGAAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAYKSDVSKKKEQEELVQFAVTEF-GQLDVMVNNAGVDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDE 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 56/193 (29.02%), Postives = 94/193 (48.70%), Query Frame = 2
Query:  152 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTN-FESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            TA++TG   G+G  I E L   G  +     NE  L E  +E+K KG +      D+  + E+++L++   +EF G+L+++VNNAG        E   E+ S +   N F + + +   A   +K    G II   S+ G  +  +   Y++TK ++   T+  A E     I VNA  P + +T + D I++
Sbjct:    4 TAIITGSAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAFKSDVSKKKEQEELVQFAVTEF-GQLDVMVNNAGVDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDE 195          
The following BLAST results are available for this feature:
BLAST of CF835861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
PECR_PONAB3.761e-1731.09Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo a... [more]
MTDH_UROFA3.761e-1730.57Probable NADP-dependent mannitol dehydrogenase OS=... [more]
DHG1_BACME3.761e-1730.21Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
BDHA_RHIME3.761e-1733.51D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
KDUD_DICD34.912e-1732.642-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
DHG_BACME4.912e-1729.69Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
DHB14_HUMAN4.912e-1733.6817-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
DHB14_BOVIN4.912e-1734.2017-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
BUTA_STAES4.912e-1729.02Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BUTA_STAEQ4.912e-1729.02Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835861 ID=CF835861; Name=CF835861; organism=Citrus sinensis; type=EST; length=728bp
CAACACCCACTCCATTTGCAAAAATATTAAGATTCTCCTATTAAATACAA
CAAATTGCTATTGTTCTCATAAGAGAAGAATAATTTCAGTTTCTGATACC
CGGAAAAACATGTCAGAATCCAGAGAACAAAGGTGGTCTCTAAAGGGTAT
GACCGCGCTTGTAACAGGTGGAACCAGAGGCATCGGACACGCAATAGTGG
AAGAACTAACGGCATTTGGAGCAATAGTGCATACATGTTCACGTAATGAA
ACAGAGCTCAATGAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTAAAGT
AAGCGGCTCGGCATGTGACCTGAAAATTAGAGCTGAGCGTCAAAAGTTGA
TGGAGACTGTATGTTCTGAATTTGATGGCAAGCTCAACATCCTTGTAAAC
AATGCTGGAACCACCATTCCTAAGGAAGCCACAGAATTTACCATGGAGGA
TTTCTCGACTATAATGACCACCAATTTCGAGTCTGCTTACCACCTGTCCC
AACTTGCATACCCCCTACTCAAAGCATCAGGAAATGGAAACATCATTTTT
ATCTCCTCTGTCACGGGTGTTATAGCTGTACCTCTATGTTCCATCTATGC
ATCAACTAAAGGAGCAATGAATCAACTGACAAAGAACTTGGCATGTGAGT
GGGGAAAGGACAACATTCGCGTGAATGCAGTTGCTCCATGGATCATTAGA
ACCTCTCTCATTGATTCCATAGAAAAGG
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