CF835861

Overview
NameCF835861
Unique NameCF835861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 51/190 (26.84%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L    A+VTG   GIG AI   L   GA V    RN+ +L     +     +KV  +  D+  + E  +L++     F G L+I++N+AG  +  + T++ ++++ +++  N +   + +Q A P +    +G++I I+S++G       +IY++TK A++ +T+ L  E  K  ++V +++P ++ T++
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 51/190 (26.84%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L    A+VTG   GIG AI   L   GA V    RN+ +L     +     +KV  +  D+  + E  +L++     F G L+I++N+AG  +  + T++ ++++ +++  N +   + +Q A P +    +G++I I+S++G       +IY++TK A++ +T+ L  E  K  ++V +++P ++ T++
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 51/190 (26.84%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L    A+VTG   GIG AI   L   GA V    RN+ +L     +     +KV  +  D+  + E  +L++     F G L+I++N+AG  +  + T++ ++++ +++  N +   + +Q A P +    +G++I I+S++G       +IY++TK A++ +T+ L  E  K  ++V +++P ++ T++
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 58/193 (30.05%), Postives = 103/193 (53.37%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE---RIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L+   A+VTG + GIG +I E L   G  V    R+E+ L E   RIQ+  +K   V  S  D+  + E  +L+E    +F G+++ILVN+AG  +    TE  +E +  ++  N +   +      P +    +G+II I+S++G       ++Y+++K A++ +T+ L  E  K  +RV +++P ++ T L
Sbjct:    4 LQDKVAVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQD--NKQAVVETSIVDVTHKEEVTELVEKTKEKF-GQIDILVNSAGLMLSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPL 193          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DECR2_ARATH (Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 58/192 (30.21%), Postives = 97/192 (50.52%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLK--------ASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKD-NIRVNAVAP 688
            ++G  AL+TGG  GIG  I  +    GA +    R +  L++ +   +S G++  G   D++ + + ++++E     F GKL+ILVN A       A + +   F T++  +    +++   A   LK        +SG G+II IS+     A       ++ K A++  T+NLA EWG D +IRVN +AP
Sbjct:   10 VRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHF-GKLDILVNAAAGNFLAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAP 200          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DCXR_BOVIN (L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 64/191 (33.51%), Postives = 95/191 (49.74%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQL-AYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L G  ALVTG  +GIG +IV+ L A GA V   SR + +L+  ++E       V     DL      ++ +  V     G +++LVNNA     +   E T E +    + N  +   +SQ+ A  L+     G I+ +SS      +   S+Y STKGA++ LTK +A E G   IRVNAV P ++ T +
Sbjct:    5 LAGRRALVTGAGKGIGRSIVKALHAAGARVVAVSRTQADLDSLVRECPG----VETVCVDLADWEATEQALGGV-----GPVDLLVNNAAVAFLQPFLEVTKEAYDMSFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSSQASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIRVNAVNPTVVMTPM 186          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: CBR2_PIG (Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 61/196 (31.12%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQL-AYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721
            +  G+ ALVTG  +GIG   V+ L   GA V   +R   +L    QE       +     DL      ++ +  V     G +++LVNNA   + +   + T E F      N  S + +SQ+ A  +++    G+I+ +SS+   +  P  + Y+STKGAM  LTK++A E G   IRVN+V P ++ T++  S+
Sbjct:    4 NFSGLRALVTGAGKGIGRDTVKALHVSGARVVAVTRTNGDLVSLSQECPG----IEPVCVDLGDWEATERALGGV-----GPVDLLVNNAAVALMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSSMVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLTAMGRSV 190          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 64/191 (33.51%), Postives = 97/191 (50.79%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            + +G  ALVTG +RGIG AI E L A GA V   + +E    + I ++   G    G   ++   A  + ++E + +EF G+++ILVNNAG T          E+++ I+ TN  S + LS+     +    +G II I SV G +     + YA+ K  +   +K+LA E     I VN VAP  I T +
Sbjct:    2 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYL--GANGKGLMLNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 64/191 (33.51%), Postives = 97/191 (50.79%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            + +G  ALVTG +RGIG AI E L A GA V   + +E    + I ++   G    G   ++   A  + ++E + +EF G+++ILVNNAG T          E+++ I+ TN  S + LS+     +    +G II I SV G +     + YA+ K  +   +K+LA E     I VN VAP  I T +
Sbjct:    2 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYL--GANGKGLMLNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 63/191 (32.98%), Postives = 94/191 (49.21%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L+G  +LVTG TRGIG AI E+L + G+ V     +        +E  +K G+K  G   +L       K  E + +  DG ++ILVNNAG T  K     ++ D+  ++  N    + ++Q +   +     G I+ ISSV G         Y++TK  +   TK+LA E    N+ VNAVAP  I T +
Sbjct:    5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194          
The following BLAST results are available for this feature:
BLAST of CF835861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
Y2778_STAA86.415e-1726.84Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC6.415e-1726.84Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA36.415e-1726.84Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
Y0419_STAS16.415e-1730.05Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
DECR2_ARATH6.415e-1730.21Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidops... [more]
DCXR_BOVIN6.415e-1733.51L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV... [more]
CBR2_PIG6.415e-1731.12Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2... [more]
FABG_SHIFL8.378e-1733.513-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI8.378e-1733.513-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG_AQUAE8.378e-1732.983-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835861 ID=CF835861; Name=CF835861; organism=Citrus sinensis; type=EST; length=728bp
CAACACCCACTCCATTTGCAAAAATATTAAGATTCTCCTATTAAATACAA
CAAATTGCTATTGTTCTCATAAGAGAAGAATAATTTCAGTTTCTGATACC
CGGAAAAACATGTCAGAATCCAGAGAACAAAGGTGGTCTCTAAAGGGTAT
GACCGCGCTTGTAACAGGTGGAACCAGAGGCATCGGACACGCAATAGTGG
AAGAACTAACGGCATTTGGAGCAATAGTGCATACATGTTCACGTAATGAA
ACAGAGCTCAATGAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTAAAGT
AAGCGGCTCGGCATGTGACCTGAAAATTAGAGCTGAGCGTCAAAAGTTGA
TGGAGACTGTATGTTCTGAATTTGATGGCAAGCTCAACATCCTTGTAAAC
AATGCTGGAACCACCATTCCTAAGGAAGCCACAGAATTTACCATGGAGGA
TTTCTCGACTATAATGACCACCAATTTCGAGTCTGCTTACCACCTGTCCC
AACTTGCATACCCCCTACTCAAAGCATCAGGAAATGGAAACATCATTTTT
ATCTCCTCTGTCACGGGTGTTATAGCTGTACCTCTATGTTCCATCTATGC
ATCAACTAAAGGAGCAATGAATCAACTGACAAAGAACTTGGCATGTGAGT
GGGGAAAGGACAACATTCGCGTGAATGCAGTTGCTCCATGGATCATTAGA
ACCTCTCTCATTGATTCCATAGAAAAGG
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