CF835861

Overview
NameCF835861
Unique NameCF835861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFG-----AIVHTCSRNET--ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            LK    +VTGG++G+G A+      FG      +V+  S  E   E+ + I+E   + + V G   D+    +   L+ET   EF G L++++NNAG   P  + E ++E+++ ++ TN   A+  S+ A      +   GN+I +SSV  +I  PL   YA++KG M  +T+ LA E+    IRVN + P  I T +
Sbjct:    5 LKDKVVVVTGGSKGLGRAMA---VRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRG---DVTKEEDVVNLVETAVKEF-GSLDVMINNAGVENPVPSHELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPI 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17
Identity = 60/196 (30.61%), Postives = 94/196 (47.96%), Query Frame = 2
Query:  155 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKAS-----GNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            ALVTG T GIG  I   L   G  V  C+R E  L   ++E +  G++  G  CD++   E + L+  V   + G +++LVNNAG        E   E +  ++ TN    + +++    +LKA      G G I+ I+S  G   V   + Y+++K  +   TK L  E  +  I VNAV P  + T +  S+ +
Sbjct:    9 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 200          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: RHLG_PSEAE (Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=rhlG PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 62/190 (32.63%), Postives = 94/190 (49.47%), Query Frame = 2
Query:  134 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGN----GNIIFISSVTGVIAV-PLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAP 688
            +SL G  ALVTGG+RGIG  I + L   GA V  C+R+     +      + G        DL   A  ++L + +  E   +L+ILVNNAGT+       + +  +  +M  N  S +   Q   PLL+ S +      +I I SV G+ A+      Y  +K A++QL++ LA E   ++I VN +AP
Sbjct:    5 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQAL-GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAP 192          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: MTDH_AGABI (NADP-dependent mannitol dehydrogenase OS=Agaricus bisporus GN=mtdH PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGA---IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPL-LKASGNGNIIFISSVTGVIAVPLCSI--------YASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            S    T +VTGG RGIG A    + A GA   +++  +++  E+ E++   K  G+K     CD+       K ++ + ++  G ++ L+ NAG ++ K ATE T EDF  +   N    ++  +    L L+    G+I+  SS++  I +   S+        Y S+K A + L K LA EW    IRVNA++P  + T     ++K
Sbjct:    8 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAKDAVEVTEKVG--KEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GAISGLIANAGVSVVKPATELTHEDFKFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI-INQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK 212          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DCXR_MOUSE (L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L G  ALVTG  +GIG + V  L A GA V   SR   +L++ ++E       V     DL      ++ +  V     G +++LVNNA   + +   E T E   T    N  +   +SQ+    + A G  G I+ +SS     A+   ++Y STKGA++ LTK +A E G   IRVNAV P ++ T +
Sbjct:    5 LAGRRALVTGAGKGIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPG----VEPVCVDLADWEATEQALSNV-----GPVDLLVNNAAVALLQPFLEVTKEACDTSFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTPM 186          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16
Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAER--QKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAP 688
            + +G   L+TG   GIG          GA V     +E +  E ++  KS G + +    D+   AE+  +K +ET      G+L+ILVNNAG        E + EDF   M  N +  + LS+ A   +K  G G I+ +SS  G+I +P   +Y+ +K A+  LT++LA ++    IRVNAV P
Sbjct:    2 NFQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQIVKKTVETF-----GRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCP 182          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16
Identity = 67/205 (32.68%), Postives = 97/205 (47.32%), Query Frame = 2
Query:  119 SREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERI-QEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVI-AVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            S    + L G  ALVTG  RGIG AI   L   GA V     N  E  E++  E KS G        D+       KLM+     F G L+I+ +NAG        + T ++F  +   N    + +++ AY  L+  G   II  SS T  +  VP  ++Y+ +KGA++   + LA + G   I VNAVAP  I+T +  S+ +
Sbjct:    2 SSSDNYRLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHF-GYLDIVSSNAGIVSFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHLREGGR--IILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSR 203          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16
Identity = 64/191 (33.51%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            S +G  ALVTG +RGIG AI E L A GA V   + +E    + I ++   G    G   ++   A  + ++E + +EF G+++ILVNNAG T          ++++ I+ TN  S + LS+     +     G II I SV G +     + YA+ K  +   +K+LA E     I VN VAP  I T +
Sbjct:    2 SFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSENGA-KNISDYL--GANGKGLMLNVTDPASIESVLENIRAEF-GEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16
Identity = 64/191 (33.51%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            S +G  ALVTG +RGIG AI E L A GA V   + +E    + I ++   G    G   ++   A  + ++E + +EF G+++ILVNNAG T          ++++ I+ TN  S + LS+     +     G II I SV G +     + YA+ K  +   +K+LA E     I VN VAP  I T +
Sbjct:    2 SFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSENGA-KNISDYL--GANGKGLMLNVTDPASIESVLENIRAEF-GEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16
Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721
            L G TAL+TG + GIG AI  +L   G+ V     NE +L     + K      +   C+L    E   L+  +      KL+ILV NAG T    A     EDF  ++  N ++ + L++ A   +  +  G II I+S+ GV   P  + Y ++K  +  +TK+LA E     I VNAVAP  I++ + D +
Sbjct:    4 LSGQTALITGASGGIGGAIARQLHKLGSHVIISGSNEEKLKALGNDLKDN---YTIKVCNLTNTEECSNLVAQI-----EKLDILVCNAGITKDTLAIRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTDKL 189          
The following BLAST results are available for this feature:
BLAST of CF835861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
DHG2_BACME8.378e-1732.32Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
ACT3_STRCO8.378e-1730.61Putative ketoacyl reductase OS=Streptomyces coelic... [more]
RHLG_PSEAE1.094e-1632.63Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-... [more]
MTDH_AGABI1.094e-1629.67NADP-dependent mannitol dehydrogenase OS=Agaricus ... [more]
DCXR_MOUSE1.094e-1633.51L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 ... [more]
Y325_THEMA1.429e-1633.33Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
STCU_EMENI1.429e-1632.68Versicolorin reductase OS=Emericella nidulans GN=s... [more]
FABG_SALTY1.429e-1633.513-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI1.429e-1633.513-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_RICBR1.429e-1632.473-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835861 ID=CF835861; Name=CF835861; organism=Citrus sinensis; type=EST; length=728bp
CAACACCCACTCCATTTGCAAAAATATTAAGATTCTCCTATTAAATACAA
CAAATTGCTATTGTTCTCATAAGAGAAGAATAATTTCAGTTTCTGATACC
CGGAAAAACATGTCAGAATCCAGAGAACAAAGGTGGTCTCTAAAGGGTAT
GACCGCGCTTGTAACAGGTGGAACCAGAGGCATCGGACACGCAATAGTGG
AAGAACTAACGGCATTTGGAGCAATAGTGCATACATGTTCACGTAATGAA
ACAGAGCTCAATGAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTAAAGT
AAGCGGCTCGGCATGTGACCTGAAAATTAGAGCTGAGCGTCAAAAGTTGA
TGGAGACTGTATGTTCTGAATTTGATGGCAAGCTCAACATCCTTGTAAAC
AATGCTGGAACCACCATTCCTAAGGAAGCCACAGAATTTACCATGGAGGA
TTTCTCGACTATAATGACCACCAATTTCGAGTCTGCTTACCACCTGTCCC
AACTTGCATACCCCCTACTCAAAGCATCAGGAAATGGAAACATCATTTTT
ATCTCCTCTGTCACGGGTGTTATAGCTGTACCTCTATGTTCCATCTATGC
ATCAACTAAAGGAGCAATGAATCAACTGACAAAGAACTTGGCATGTGAGT
GGGGAAAGGACAACATTCGCGTGAATGCAGTTGCTCCATGGATCATTAGA
ACCTCTCTCATTGATTCCATAGAAAAGG
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