CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.037e-57
Identity = 114/188 (60.64%), Postives = 141/188 (75.00%), Query Frame = 2
Query:   92 LVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            LV     +SAQLS+ FY ++CP  L+T++S V SAV +E R+GASLLRLHFHDCFV GCD S+LL+DTS   GE++ GPN+  + RGF VV+ IK++VE VCPG+VSCADILA+AAR  V  LGGPSW V LGRRDS TAS A   S  +PPPTS+L  L++ +  K L+  DMVALS AHTIGQA+C
Sbjct:   20 LVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQC 202          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 9.944e-56
Identity = 104/197 (52.79%), Postives = 141/197 (71.57%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            SL   L +  +++ +    AQLS  FY ++C   L+ ++S+V++A+++ERRM ASL+R+HFHDCFV+GCD SILL+ TS+   E+ + PN  S RGFEV+D  KS+VEKVCPG+VSCADI+A+AAR +   +GGP W VK+GRRDS  A  A ANSG +P    TL  L   F  KGL+ +D+VALS AHTIGQ++C
Sbjct:    5 SLRFVLMMVSIILTSSICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.944e-56
Identity = 113/198 (57.07%), Postives = 138/198 (69.70%), Query Frame = 2
Query:   59 SSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S+  V+L L         +SAQLS  FY  +CP  L+T+KSAV +AV+ E RMGASL+RLHFHDCFV GCD S+LL        E+ +GPN  S RGF VVD+IK++VE +C   VSCADILA+AAR SV  LGGPSW V LGRRDS TA+ + AN+  +P P+S+L+ LI  F  KGL   DMVALS AHTIGQA+C
Sbjct:    3 SASSVSLMLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTD-LPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQC 194          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 9.944e-56
Identity = 113/198 (57.07%), Postives = 138/198 (69.70%), Query Frame = 2
Query:   59 SSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S+  V+L L         +SAQLS  FY  +CP  L+T+KSAV +AV+ E RMGASL+RLHFHDCFV GCD S+LL        E+ +GPN  S RGF VVD+IK++VE +C   VSCADILA+AAR SV  LGGPSW V LGRRDS TA+ + AN+  +P P+S+L+ LI  F  KGL   DMVALS AHTIGQA+C
Sbjct:    3 SASSVSLMLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ-----EQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTD-LPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQC 194          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.299e-55
Identity = 103/183 (56.28%), Postives = 132/183 (72.13%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            G SSAQL+  FYS TCP     V+S +Q A+  + R+G SL+RLHFHDCFVNGCDGS+LLDDTSS   EK +  N NS RGF VVD IK+ +E  CPG+VSC+DILA+A+  SV++ GGPSW V LGRRD  TA+L+ ANS  +P P   L+N+ ++F A GL   D+V+LS AHT G+ +C+
Sbjct:   27 GTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSS-LPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCV 208          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.299e-55
Identity = 106/176 (60.23%), Postives = 130/176 (73.86%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L    Y  +CP+  + V S V++ V ++ RM ASLLRLHFHDCFVNGCD S+LLDDT    GEKT+ PN+NS RGFEV+D IKS +E VCP  VSCADILA+AAR SV + GGP W V++GR+DS+TAS  AA +G +P P ST+S LI+ FQ  GLS  DMVALS  HT+G+ARC
Sbjct:   50 LDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNG-LPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARC 224          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.696e-55
Identity = 104/182 (57.14%), Postives = 133/182 (73.08%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            G   + L   FY  +CP+    V + ++ A++KE RM ASLLRLHFHDCFV GCD SILLDD+++   EK +GPN NS RGF+V+D+IK+K+E+ CP  VSCADILA+AAR S  + GGPSW + LGRRDS+TASL  AN+  IP P ST+ NL+  FQ KGL+ +D+V+LS  HTIG ARC
Sbjct:   39 GSFYSNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTN-IPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARC 219          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.779e-55
Identity = 108/201 (53.73%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDT-SSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            SFS L+  +AL  + +F+  S+AQLS+ FYS TCP +   V++ VQ A+  + R+G SL+RLHFHDCFV+GCDGS+LLD+  ++   EK + PN NS RGF+VVD+IK+ VE  CPGVVSC DILA+A+  SV++ GGPSWNV LGRRD +TA+   AN+  +P P   L+NL  +F   GL+  D+VALS AHT G+A+C
Sbjct:    3 SFSPLLA-MALA-IFIFSSHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTS-LPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQC 200          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.127e-54
Identity = 113/198 (57.07%), Postives = 141/198 (71.21%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            SL+V +    L   T  +SAQLS+ FY  +CP  ++T+ S V SAV+++ R+GASLLRLHFHDCF+ GCD SILL+DTS   GE+T  PN+  + R F+VV+ IK++VE  CPGVVSCADILA+AAR  V  LGGPSW V LGRRDS T S  +  S  +PPPTS+L  L+  +  K L A DMVALS AHTIGQA+C
Sbjct:   12 SLLVVVVAAALSAST--ASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQC 202          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.293e-52
Identity = 102/179 (56.98%), Postives = 126/179 (70.39%), Query Frame = 2
Query:  116 SAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            ++ L+  FY ++CP+L   VKS V  A   + R+ ASLLRLHFHDCFVNGCDGSILL+D+  F GEK + PN NS RGFEV++DIKS +E  CP  VSCADI+A+AAR +V + GGP W V LGRRDS TAS  AAN+  +P P   L N+  +F   GL  KD+V LS AHTIG A+C
Sbjct:   45 TSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTN-LPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQC 222          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER66_MAIZE4.037e-5760.64Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER5_ARATH9.944e-5652.79Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER2_ORYSJ9.944e-5657.07Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI9.944e-5657.07Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER54_ARATH1.299e-5556.28Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER40_ARATH1.299e-5560.23Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER9_ARATH1.696e-5557.14Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER15_IPOBA3.779e-5553.73Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER42_MAIZE7.127e-5457.07Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER10_ARATH2.293e-5256.98Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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