CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.911e-52
Identity = 101/200 (50.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            SF  L+  +    L +       +L   +Y+ +CP++   V+S V  AV++E RM ASLLRLHFHDCFV GCDGS+LLD +     EK S PN  SARGF+VVD IK+++EK CPG VSCAD+L +AAR S  + GGPSW V LGRRDS++ASL+ +N+  IP P +T   ++++F  +GL   D+VALS +HTIG +RC
Sbjct:    6 SFLLLLSLICFVPLCLCDKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNN-IPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.670e-52
Identity = 105/194 (54.12%), Postives = 133/194 (68.56%), Query Frame = 2
Query:   71 VTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            V L +  L +      AQLS + Y+K+CP LL  V+  V+ A+  E RM ASL+RLHFHDCFVNGCD S+LLD T+S   EK + PN+NS RGFEV+D IK+ VE  CPGVVSCADIL +AAR SV + GGP W V LGR+D   A+ ++AN+  +P P   L  +I +F A GL+  D+VALS AHT GQA+C
Sbjct:   12 VLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNS---EKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN--LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKC 200          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.486e-51
Identity = 99/182 (54.40%), Postives = 124/182 (68.13%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            G     L   FY  +CP+    V+S V  AV++E RM ASL+RLHFHDCFV GCDGS+LLD + S   EK S PN  SARGFEVVD+IK+ +E  CP  VSCAD L +AAR S  + GGPSW V LGRRDS +ASL+ +N+  IP P +T + ++ RF  +GL   D+VALS +HTIG +RC
Sbjct:   30 GGDKGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNN-IPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRC 210          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.941e-51
Identity = 99/181 (54.70%), Postives = 134/181 (74.03%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            S AQLS  FY +TC   L+T++S++++A+S+ERRM ASL+RLHFHDCFVNGCD S++L  T +   E+ S  N  SARGFEV+D  KS VE VCPGVVSCADI+A+AAR +   +GGP ++VK+GRRDS  A  A A+   +P   ++L++L   F  KGL+ +D+VALS AHT+GQA+C+
Sbjct:   17 SQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRD-LPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCL 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 5.647e-51
Identity = 107/207 (51.69%), Postives = 135/207 (65.22%), Query Frame = 2
Query:   44 MAFSFSSLMV---TLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            M FS+SSL      + LG L++ +  SSAQL+  FY  TCP +   V+  + + +  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK + PN NSARGF V+D +K+ VE  CP  VSCADIL IAA+ +V + GGPSW V LGRRDS  A  A AN+  +P P  TL  L   FQ  GL    D+VALS  HT G+ +C
Sbjct:    1 MNFSYSSLSTWTTLMTLGCLLLHSSISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTN-LPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQC 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.643e-50
Identity = 101/195 (51.79%), Postives = 137/195 (70.26%), Query Frame = 2
Query:   77 LALGFLVVF--TGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            + LGFL++      S AQLS +FY KTCP++ + V + + +A+  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF+V+D +K+ +EK CP  VSCAD+LAIAA+ S+ + GGPSW V  GRRDS    +  AN   +P P+STL  L +RF+  GL  + D+VALS  HT G+++C
Sbjct:    6 IKLGFLLLLLQVSLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDN-LPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQC 199          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50
Identity = 108/193 (55.96%), Postives = 134/193 (69.43%), Query Frame = 2
Query:   77 LALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTG-EKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            ++L  LV     +S QLS+ FY  +CP+ L  +KS V +AVS + RMGASLLRLHFHDCF  GCD S+LL      TG E+ +GPN+ S RGF V+D+IK+++E VC   VSCADIL +AAR SV  LGGPSW V LGRRDS TAS + ANS  +P P+S+ S L   F  K L+  DMVALS AHTIG+A+C
Sbjct:    9 ISLVVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL------TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSD-LPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQC 192          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.243e-50
Identity = 96/180 (53.33%), Postives = 124/180 (68.89%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S   L   FY ++CPK    V+S V  A   + RM ASLLRLHFHDCFV GCD SILLD + +   EK S PN NSARGFE++++IK  +E+ CP  VSCADILA+AAR S  I GGPSW V LGRRD++ ASL+ +N+  IP P +T   ++ +F+ +GL   D+V+LS +HTIG +RC
Sbjct:   29 SGGYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNND-IPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRC 207          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 6.243e-50
Identity = 104/194 (53.61%), Postives = 129/194 (66.49%), Query Frame = 2
Query:   71 VTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            V L +  L +      AQLS + Y+K+CP L+  V+  V  A+  E RM ASL+RLHFHDCFVNGCD S+LLD   S   EK + PNINSARGFEV+D IK+ VE  CPGVVSCADIL +AAR SV + GGP W V LGR+D   A+  +AN+  +P P   L  +I +F A  L+  D+VALS AHT GQA+C
Sbjct:   12 VLLTVFTLCMLCSGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN--LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKC 200          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.154e-50
Identity = 101/198 (51.01%), Postives = 134/198 (67.68%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            S ++ L    L++    S AQLS +FY KTCP++ +   + + +A+  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF+V+D +K+ VEK CP  VSCAD+LAIAA+ SV + GGPSW V  GRRDS    +  AN   +P P  TL+ L +RF+  GL  A D+VALS  HT G+ +C
Sbjct:    3 SSLIKLGFLLLLIQVSLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDN-LPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQC 199          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER49_ARATH3.911e-5250.50Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PERN_ARMRU6.670e-5254.12Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER15_ARATH1.486e-5154.40Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER4_ARATH1.941e-5154.70Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER32_ARATH5.647e-5151.69Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER38_ARATH1.643e-5051.79Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER1_WHEAT3.660e-5055.96Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER72_ARATH6.243e-5053.33Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER59_ARATH6.243e-5053.61Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER37_ARATH8.154e-5051.01Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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