CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 101/202 (50.00%), Postives = 139/202 (68.81%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVV-FTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            S ++LMV L +  + V +    +AQLST FY  TCP  L+T++++++S+VS  RR  A ++RL FHDCFV GCD S+LL    S  G + + P  +   G+EV+D  K+ VE+VCPGVVSCADILA+AAR +   +GGPSW V+LGRRDS T++ A A +  +P     LS LI+ F  KGL+ ++MVALS +HT+GQARCI
Sbjct:    7 SGTTLMVPLFMLLISVNYFMSCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLL----SGAGSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATD-LPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCI 203          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.632e-48
Identity = 103/209 (49.28%), Postives = 134/209 (64.11%), Query Frame = 2
Query:   44 MAFSFSSLM-----VTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            M FS SS+      V + +G L++    S AQL+  FY  +CP + N V+  + + +  + R+  S+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF V+D +K+ VE+ CP  VSCAD+L IAA+ SV + GGPSW V LGRRDS  A L  AN+  +P P  TL  L   F+  GL    D+VALS AHT G+ +C
Sbjct:    1 MQFSSSSITSFTWTVLITVGCLMLCASFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANAN-LPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQC 208          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.632e-48
Identity = 102/201 (50.75%), Postives = 131/201 (65.17%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            SF+ +++TL  G L  +   S AQL+  FY  +CP + N V+  + + +  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF  VD IK+ VE+ CP  VSCAD+L IAA+ SV + GGPSW V LGRRDS  A L  AN+  +P P  TL  L + F   GL    D+VALS  HT G+ +C
Sbjct:    8 SFTWILITL--GCLAFYASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANAN-LPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQC 205          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.302e-47
Identity = 100/198 (50.51%), Postives = 136/198 (68.69%), Query Frame = 2
Query:   65 LMVTLALGFLVV-FTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            LMV L +  + V +    +AQLST FY  TCP  L+T++++++S+VS  RR  A ++RL FHDCFV GCD S+LL    S  G + + P  +   G+EV+D  K+ VE+VCPGVVSCADILA+AAR +   +GGPSW V+LGRRDS T++ A A +  +P     LS LI+ F  KGL+ ++MVALS +HT+GQARCI
Sbjct:   11 LMVPLFMLLISVNYFMSCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLL----SGAGSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATD-LPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCI 203          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.900e-47
Identity = 94/179 (52.51%), Postives = 122/179 (68.16%), Query Frame = 2
Query:  122 QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARCI 655
            QL  +FYS+TCP + N +K+ +   +  + R+ AS+LRLHFHDCFV GCD SILLD + SF  EK + PN+NSARGF V+D +K+ +E+ CP  VSCADIL IA++ SV + GGPSW V LGRRDS  A    AN+  +P P  TL+ L   F   GL+   D+VALS  HT G+ARC+
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANT-ALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCL 178          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.788e-47
Identity = 106/201 (52.74%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAK-GLSAKDMVALSXAHTIGQARC 652
            S++SL+V +AL         +SAQLS  FY  +CP+ L T+KS V +AV+ + RMGASLLRLHFHDCFV GCD S+LL        E+ + PN  S RGF V+D IK+++E +C   VSCADIL +AAR SV  LGGPSW V LGRRDS  A+   AN+  +P   S+ + L   F  K GL+  DMVALS AHTIGQA+C
Sbjct:    5 SYTSLLVLVAL------VTAASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTD-LPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQC 193          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.947e-47
Identity = 94/198 (47.47%), Postives = 132/198 (66.67%), Query Frame = 2
Query:   59 SSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S  +V   L  +++F   +S  L   FYSKTCP+L   VK  V  A++K   +GA LLR+ FHDCFV GCDGS+LLD  ++  GEK++ PN+ S RGF ++DD K+ +EKVCPG+VSC+DILA+ AR ++  L GPSW V+ GRRD + +++   N   +P P   ++ LI+ F++KGL+ KD+V LS  HTIG   C
Sbjct:    4 SKRLVVSCLFLVLLFAQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVPNL-SLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEVN---LPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHC 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.880e-46
Identity = 96/181 (53.04%), Postives = 123/181 (67.96%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            S+AQL+  FY  +CP + N V+  + + +  +  + AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF VVD IK+ VE+ CP  VSCAD+L IAA+ SV + GGPSW V LGRRDS+ A L  AN+  +P P+ TL  L   F   GL+   D+VALS  HT G+ +C
Sbjct:    7 SNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANAN-LPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQC 186          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.455e-46
Identity = 97/198 (48.99%), Postives = 128/198 (64.65%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            S M  L L  L++    S+AQL  +FY +TCP + N +   +   +  + R+ ASLLRLHFHDCFV GCD SILLD+++SF  EK + PN NSARGF V+D +K+ +E+ CP  VSCAD+L IA++ SV + GGP W V LGRRDS  A    AN+  +P P  TL+ L   F   GL+   D+VALS  HT G+A+C
Sbjct:   10 SAMGALILSCLLLQASNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANT-ALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQC 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.455e-46
Identity = 101/202 (50.00%), Postives = 132/202 (65.35%), Query Frame = 2
Query:   53 SFS-SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            SFS S +  L LG L++    S+AQL  +FY  TCP + + + + +   +  + R+ ASLLRLHFHDCFV GCD SILLD+++SF  EK + PN NSARGF V+D +K  +E+ CPG VSCADIL IA++ SV + GGP W V LGRRDS  A  A AN+  +P P   L+ L   F   GL+   D+VALS  HT G+A+C
Sbjct:    6 SFSCSAIGALILGCLLLQASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANT-ALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQC 206          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER2_ZINEL5.844e-4850.00Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER33_ARATH7.632e-4849.28Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1B_ARMRU7.632e-4850.75Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1_ZINEL1.302e-4750.51Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PERE5_ARMRU2.900e-4752.51Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER1_HORVU3.788e-4752.74Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER27_ARATH4.947e-4747.47Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1C_ARMRU1.880e-4653.04Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER3_ARMRU2.455e-4648.99Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER22_ARATH2.455e-4650.00Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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