CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.545e-45
Identity = 93/198 (46.97%), Postives = 129/198 (65.15%), Query Frame = 2
Query:   68 MVTLALG---FLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            ++ +AL    FLV   G   AQL  NFY+ +CP     V+  V + VS    + A+L+R+HFHDCFV GCDGS+L++ TS    E+ + PN+ + RGF  +D IKS +E  CPG+VSCADI+A+A+R +V   GGP+W+V  GRRD + ++ A A +  IPPPTS ++NL   F  +GL  KD+V LS AHTIG + C
Sbjct:    4 LIAIALSVSFFLVGIVGPIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSG-NAERDATPNL-TVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALAN-IPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHC 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.047e-45
Identity = 97/199 (48.74%), Postives = 128/199 (64.32%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLD--DTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S  + L L  +++F   S+AQL+++FYS TCP +    +  ++ A   + R+ A ++RLHFHDCFVNGCDGS+LLD        GEK +  N  S  GFEV+DDIK+ +E VCPGVVSCADILAIAA  SVA+ GGPS +V LGRRD +TA  A A    +P    +L  L ++F    L   D+VALS AHT G+ +C
Sbjct:    4 SKTIPLVLLPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADA-VAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.298e-44
Identity = 89/172 (51.74%), Postives = 116/172 (67.44%), Query Frame = 2
Query:  137 FYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            FY ++CP + N V+  VQ A+  + R GA L+RLHFHDCFVNGCDGS+LL+D      E  +  N N   GF +V++IK+ VEK CPGVVSCADILAIA+  SV + GGP W V+LGRRDS+ A+L  A  G +P P   ++ L  +F    L + D+VALS AHT G++RC
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANIT-GFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDG-LPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRC 171          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.686e-44
Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTG-EKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            +L++ L +  LV F   S AQL   FY +TCP     V+  V   ++    + A L+R+HFHDCFV GCDGSIL++ TSS    EK + PN+ + RGF+ +D +KS +E  CPG+VSCADI+ +A R S+  +GGP+WNV  GRRD + ++ A A +  IPPP    + LI  F  +GL  KD+V LS AHTIG + C
Sbjct:    7 ALLMILVIQGLVTF---SEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNL-TVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNN-IPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHC 199          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.334e-43
Identity = 91/166 (54.82%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  161 LLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDD-TSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            + + V+  V SA+  E RMGASL+RLHFHDCFV+GCDG ILLDD   +FTGE+ S PN NSARG+EV+   K  V   CP + VSCADILAIAAR SVA LGG ++NV LGR D++TA+   A +  +P P   L+  I +F  K  + ++MVAL+ AHT+G ARC
Sbjct:   81 VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALT-QLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARC 245          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 89/196 (45.41%), Postives = 126/196 (64.29%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            ++VT+ +G L      S AQL  NFY+K+CP     +   +Q+ +     + A L+R+HFHDCFV GCDGS+L++ TS    E+ + PN+ + RGF  V+ IK+ +EKVCP  VSCADI+A+ AR +V   GGPSW+V  GRRD + ++   A +  IPPPTS  + L   F+ +GL+ KD+V LS AHTIG + C
Sbjct:   13 VVVTVLIGML----RSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSG-NAERDAPPNL-TLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNN-IPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43
Identity = 91/166 (54.82%), Postives = 117/166 (70.48%), Query Frame = 2
Query:  161 LLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDD-TSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            + + V++ V SA+  E RMGASL+RLHFHDCFV+GCDG ILLDD   +FTGE+ S PN NSARG+EV+   K  V   CP V VSCADILAIAAR SVA LGG +++V LGR D++TA+ + A    +P P   L+  I +F  K  + ++MVAL+ AHT+G ARC
Sbjct:   82 VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGA-INQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARC 246          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.392e-43
Identity = 94/182 (51.65%), Postives = 120/182 (65.93%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDD-TSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S   LS     ++C  + + VK  V SA+  E RMGASL+RLHFHDCFV+GCDG ILLDD   +FTGE+ S PN NS RGFEV+   K  V   CP + VSCADILAIAAR S+A LGG ++ V LGR D+ TA+ + A    +P P+  L+  I +F  K  + ++MVAL+ AHT+G ARC
Sbjct:   67 SDKYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGA-INQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC 245          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42
Identity = 90/200 (45.00%), Postives = 118/200 (59.00%), Query Frame = 2
Query:   59 SSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCIA 658
            +S  V LAL         SSAQL   FYS +CP +   V+  +  A+     +   LLR+HFHDCFV GCDGS+LLD   + T EK + PN  + RGF  V+ +K+ VEK CPG VSCAD+LA+ AR +V +  GP W V LGRRD + +   A  +  +PPPT+  + L   F AK L  KD+V LS  HTIG + C +
Sbjct:    2 ASSRVILALLLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPN-QTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVS--IANETDQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFS 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.669e-42
Identity = 84/176 (47.73%), Postives = 116/176 (65.91%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L   FY K CPK    VK +V  AV  +R + A LLR+ FHDCFV GC+GS+LL+   +   EK S PN+ + RGFE++D++K+ +EK CPG+VSC+D+LA+ AR ++  L GPSW V+ GRRD    ++  A    +P P + +S+LI +FQ+KGL  KD+V LS  HTIG   C
Sbjct:   32 LKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLE-LKNKKDEKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLN-LPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHC 204          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER3_ARATH3.545e-4546.97Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER58_ARATH6.047e-4548.74Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_CUCSA2.298e-4451.74Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER39_ARATH6.686e-4445.96Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PERX_SOLTU4.334e-4354.82Suberization-associated anionic peroxidase OS=Sola... [more]
PER30_ARATH5.660e-4345.41Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_SOLLC5.660e-4354.82Suberization-associated anionic peroxidase 1 OS=So... [more]
PER2_SOLLC7.392e-4351.65Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_ORYSJ1.647e-4245.00Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER56_ARATH3.669e-4247.73Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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