CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.173e-42
Identity = 89/193 (46.11%), Postives = 123/193 (63.73%), Query Frame = 2
Query:   77 LALGFLVVFTGKSSAQ-LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L L  +V+F      Q LS ++Y  TCP+  + V +AV+ A+S ++ + A+LLR+HFHDCFV GCDGS+LLD       EK   PNI S   F V+D+ K  +E+ CPG+VSCADIL++AAR +VA+ GGP+W V  GR+D + +   A  +  +P PT  +S L   F  +GLS  D+VALS  HT+G A C
Sbjct:    6 LNLLVIVIFVVSFDVQALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNI-SLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISK--AIETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHC 195          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.821e-41
Identity = 91/209 (43.54%), Postives = 129/209 (61.72%), Query Frame = 2
Query:   32 KEQKMAFSFSS-LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLD-DTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            KE K+    ++ L V  A    ++    + AQL   FY  +CP     V+ AV +A +K+  + A L+RLHFHDCFV GCDGS+LL  +      E+ + PN  S RGF+V+D  K+ VE+ CP  VSCADI+A AAR S+++ G  S+ V  GRRD + ++  A  +  +PPPTST  +L + F+AK LS +DMV LS AHT+G++ C
Sbjct:    3 KESKLTAGVAAALTVVAACALCLLLPATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN--ATETVDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFC 209          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.378e-41
Identity = 88/200 (44.00%), Postives = 120/200 (60.00%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            +FS  ++   +  ++     S A L  ++Y ++CP     +   V++A   + ++ A LLR+ FHDCF+ GCD SILLD T S   EK   PNI S R F V++D K K+EK CP  VSCAD++AIAAR  V + GGP W+V  GR+D   +   A  +  +PPPT  +S LI  F A+GLS KDMV LS  HTIG + C
Sbjct:    2 AFSKGLIFAMIFAVLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTIS--RANETRNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHC 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.378e-41
Identity = 96/199 (48.24%), Postives = 124/199 (62.31%), Query Frame = 2
Query:   59 SSLMVT-LALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            SS  VT L+L +++VF   S   L   FY  +C      VK  V+    ++  +   L+R+HFHDCFV GCDGS+L+D T S T EK S  N  S RGFEV+D  K+++E VC GVVSCADI+A AAR SV I GG  ++V  GRRD +  SLA+  S  +PPPT T+  L   F  KGL+  +MV LS AHTIG++ C
Sbjct:   41 SSKRVTWLSLTWVLVFLCLS---LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGR-ISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHC 235          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.298e-41
Identity = 85/196 (43.37%), Postives = 123/196 (62.76%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L+    LG  +  T          FYS+TCP+  + V+S V+S V+ +  + A +LR+HFHDCFV GCDGSIL+   ++   EKT+  N+   RG+E++DD K+++E  CPGVVSCADILA+AAR SV + GG SW V  GRRD + +   A++   +P P+ ++     +F AKGL+ +D+V L   HTIG + C
Sbjct:   12 LVFVFMLGLCIGITTVHGQGTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT---EKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQ--ASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSEC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 9.036e-41
Identity = 86/199 (43.22%), Postives = 128/199 (64.32%), Query Frame = 2
Query:   56 FSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            +++  + LAL  + VF G S A L   FYS TCP+  + VK  V  A   +  + A LLRLHFHDCFV GCDGSIL+++ +    EK +  +    RGFE+V+ +K+++E  CPGVVSC+DI+A+AAR ++++  GP++ V  GRRD + ++++ A    +P  + ++  L  +F  KGL+AKD+V LS AHTIG   C
Sbjct:    3 WANAKMRLALSLVTVFFGISLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGA--ISEKNAFGH-EGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD--MPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTAC 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40
Identity = 93/201 (46.27%), Postives = 128/201 (63.68%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            +F S  V   LGF     GKSS +LS +     C  + + VK  V +A++ E RMGASL+RLHFHDCFV+GCDG ILL+DT++FTGE+ +  N NS RGF V+D  K   +  C    VSCAD+LAIAAR +       ++N+ LGR+D++TA+L  AN+  +P P   LS    +F  KG + ++MV L+ AHT+G +RC
Sbjct:   47 TFDSADVLSYLGF-----GKSSGRLSDS----NC--VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANT-QLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.629e-40
Identity = 88/190 (46.32%), Postives = 120/190 (63.16%), Query Frame = 2
Query:   92 LVVFTGKS--SAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            LV+  GK   S  L   +YS +CPK  + V+S V+S    +  +   LLRLHFHDCFV GCDGS+L+   S+   E+ + PN+   RG EV+DD K+++E VCPGVVSCADILA+AAR SV +  GPSW V  GR+D + +    A++  +P P  +++    +FQ KGL   D+V L  AHTIGQ  C+
Sbjct:   16 LVLVLGKEVRSQLLKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSA---EQAALPNLG-LRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN--LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCL 199          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.991e-40
Identity = 87/199 (43.72%), Postives = 126/199 (63.32%), Query Frame = 2
Query:   56 FSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            FSSL+V   + F + F     AQL   FYS++CP+    V++ V+        + A+LLR+HFHDCFV GCD S+L+D T+S   EKT+GPN  S R F+++D IK+++E  CP  VSCADI+ +A R SVA+ GGPS+++  GRRD + ++        +P PT ++S  ++ F  KG++  D VAL  AHT+GQ  C
Sbjct:    7 FSSLLVLFFI-FPIAF-----AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTNS---EKTAGPN-GSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNNLDV---TLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNC 192          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.907e-39
Identity = 83/202 (41.09%), Postives = 126/202 (62.38%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQ------LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L++T     ++   G+++A+          FY  TCP+    V++AV +  S + R+   +LR+HFHDCFV GCDGSIL+   ++   E+T+GPN+N  +GFEV+D+ K+++E  CPGVVSCADILA+AAR +V +  G  W V  GRRD + +   A+N+  +P P  +++    +F A GL+ +D+V L   HTIG A C
Sbjct:    9 LLITFLNCLIISVHGQATARPGPVSGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVS--LASNANNLPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGC 204          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER64_ARATH8.173e-4246.11Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER1_MAIZE1.821e-4143.54Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER66_ARATH2.378e-4144.00Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER5_VITVI2.378e-4148.24Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER2_ARAHY5.298e-4143.37Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER43_ARATH9.036e-4143.22Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PERN_IPOBA1.541e-4046.27Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER25_ARATH2.629e-4046.32Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER57_ARATH9.991e-4043.72Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER71_ARATH2.907e-3941.09Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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