CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.476e-39
Identity = 79/178 (44.38%), Postives = 117/178 (65.73%), Query Frame = 2
Query:  119 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            AQL   FYS++CP     V++ V+   +++  + A+L R+HFHDCFV GCD S+L+D T+S   EK +GPN  S RGFE++D+IK+ +E  CP  VSC+DI+ +A R +V + GGPS+ V  GRRD   ++   AN  ++PPP  ++  +++ F  KG++  D VAL  AHT+G A C
Sbjct:   21 AQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANE-ILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASC 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.105e-38
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            LS  +Y  +CP     VK++V +A+  +  + A L+R+ FHDCF+ GCD SILLD T   T EK S  N+ S RG+E++DD K K+E  CPGVVSCADI+A+AAR +V   GGP +++  GR D K + +    +  +P P    S LI  F  +G + +D+VALS AHT+G ARC
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN--LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARC 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.443e-38
Identity = 80/194 (41.24%), Postives = 129/194 (66.49%), Query Frame = 2
Query:   74 TLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            +L L FL  FT +S  +L+TNFYSKTCP+ L+ ++  + +         A+++RL FHDCF NGCD S+L+  T+  T E+ S  N++    GF+V+   K+ +E  CP  VSC+DI+++A R  +  +GGP ++V LGRRDS+T S ++  + ++P P++ +S +I +F++KG + ++MVALS AH+IG + C
Sbjct:    6 SLFLLFLFFFTAQS--RLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRT-SKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHC 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.443e-38
Identity = 85/195 (43.59%), Postives = 120/195 (61.54%), Query Frame = 2
Query:   77 LALGFLVVFTGKSSA---QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            LAL  L+   G S A    L  ++Y   CPK    V+      VS+++ + A LLR+HFHDCFV GCDGS+LL    +   E+ + PN+ + +G+EVVD  K+ +E+ CP ++SCAD+LA+ AR +VA++GGP W V LGRRD + + L  A    +P P + +  L   F  KGL+AKD+V LS  HTIG + C
Sbjct:    7 LALVVLLSVVGVSVAIPQLLDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLN-LPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSC 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38
Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  161 LLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            + + VK  V +A++ E RMGASL+RL FHDCFV+GCD  +LL+DT++FTGE+T+  N NS RGF V++  K  V+   P + VSCADIL+IAAR S     G ++ V LGR+D++TA+   AN+ ++  P   L++ + +F AKG +  +MVAL  +HTIG ARC
Sbjct:   71 VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLV-GPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARC 234          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.351e-38
Identity = 82/207 (39.61%), Postives = 127/207 (61.35%), Query Frame = 2
Query:   35 EQKMAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            EQ    + + +++ L L F  +     S  L+ +FYSK+CPK L+ ++  + +         A+ LRL FHDCF NGCD S+L+  T+  T E+ S  N++    GF+VV   K+ +E  CP  VSC+DI+A+A R  +  +GGP + + LGRRDS+T S ++  S ++P P+  +S LI++F ++G S ++MVALS AHTIG + C
Sbjct:    3 EQSQLKNLTIILLLLCLSFQSLSFAAES-HLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRT-SKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHC 207          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.351e-38
Identity = 89/200 (44.50%), Postives = 128/200 (64.00%), Query Frame = 2
Query:   68 MVTLALGFLVVF----TGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALS-XAHTIGQARC 652
            M+T+AL  ++++     G S+AQL   FYS+TCP   + V+  VQ AV+ +    A LLRL FHDCFV GCDGSIL+    +   E+ +  N   A GF+V+D+ KS++E+ CPGVVSCADI+A+AAR ++A   GP + V  GRRD   A++  A +  +P    +++ L ++F+ KGLS +D+V LS  AHTIG   C
Sbjct:    1 MITIALFLVLLYFHDQLGYSAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN--LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTAC 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.221e-37
Identity = 79/172 (45.93%), Postives = 117/172 (68.02%), Query Frame = 2
Query:  137 FYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            FYS TCP+  + V+S V++    +  +   +LR+HFHDCFV GCDGSIL++ + +   E+T+ PN N  +GF+V++D K+++E +CPGVVSCADILA+AAR SV    G +W+V  GRRD + +   AA++G +P    ++     +F  KGL+ +D+VAL+ AHTIG A C
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSDA---ERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVS--RAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.595e-37
Identity = 78/177 (44.07%), Postives = 113/177 (63.84%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            LS NFY K CPK+ N ++  ++    ++  + A++LR+HFHDCFV GC+ S+LL  ++S  GE++S PN+    + F V++++++ V+K C  VVSC+DILA+AAR SV + GGP + V LGRRDS   +        +PPP    S LI  F  + L+  D+VALS  HTIG A C
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHC 220          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.083e-37
Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 2
Query:   80 ALGFLVVFTGKSS-AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVAL-SXAHTIGQARC 652
            AL FL  F   S+ AQL T FYS++CP+  + V S V +    ++ + A+ LR+ FHDCFV GCD S+L+D       EK++GPN  S RG+E++D+ K ++E  CP  VSCADI+ +A R SVA+ GGP ++V  GRRD   ++    N   +P PT  +S  I  F A+G++  DMV L    H++G A C
Sbjct:    6 ALFFLFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSN---PNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHC 194          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER28_ARATH6.476e-3944.38Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER47_ARATH1.105e-3846.02Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER31_ARATH1.443e-3841.24Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER1_ARATH1.443e-3843.59Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PERA_IPOBA2.461e-3848.48Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER63_ARATH9.351e-3839.61Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER13_ARATH9.351e-3844.50Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PERN1_TOBAC1.221e-3745.93Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER12_ARATH1.595e-3744.07Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER44_ARATH2.083e-3743.01Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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