CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.553e-37
Identity = 86/199 (43.22%), Postives = 119/199 (59.80%), Query Frame = 2
Query:   59 SSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVAL-SXAHTIGQARC 652
            S  +V + L  L+   G+ +      FYS TCP     V++ V S    + ++   LLR+H HDCFV GCDGS+LL   +S   E+T+G N+N   GFEV+DD K ++E  CPGVVSCADILA+AAR SV++  G SW V  GRRD + +   A+N   +P P+ +L+    +F A  L+ +D+V L    HTIG A C
Sbjct:    6 SFALVIVFLSCLIAVYGQGTR---IGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPNS---ERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVS--LASNVNNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAAC 195          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.553e-37
Identity = 83/179 (46.37%), Postives = 117/179 (65.36%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTS-SFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAIL--GGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L   +Y  TCP+    VK++++ A+++    GA+++R+ FHDCFV GCD S+LLD T  S T EK + PN  S RGFE++D IK  +E  CPGVVSCADI+A AAR +   L  G  S+++  GR D  T S A+ +   + PPTS LS+L + F  KG+S +D+V LS AHT+G++ C
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDG-TFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 212          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.916e-37
Identity = 80/173 (46.24%), Postives = 112/173 (64.74%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPG-VVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTI 637
            LS +FY ++CPK  + V+S VQ AV ++  + A LLRLHFHDCFV GCD S+LLD +++  GE+ + PN+      F+ ++DI  ++ K C G VVSC+D+LA+AAR SV + GGPS+ V LGRRDS + +        +PPPT+ +  L+       L A D+VALS  HTI
Sbjct:   41 LSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.131e-36
Identity = 86/201 (42.79%), Postives = 115/201 (57.21%), Query Frame = 2
Query:   50 FSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            FS       L+   L++    S A+LS NFY+ +CP     V++ V+SA S +  +   LLRL FHDCFV GCDGS+L+       G + S P   S  GF V++ +K+ +E  CPG VSCADIL +AAR +V  LGGP   +  GRRD + +  A     +I     T+  +IN F +KGLS  D+V LS AHTIG A C
Sbjct:    6 FSCKPKYTFLSSLLLLLLLSSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGN----GTERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNII-DTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36
Identity = 86/197 (43.65%), Postives = 117/197 (59.39%), Query Frame = 2
Query:   68 MVTLALGFLVV-FTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSAR-GFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            M+   LG L+     +S+AQLS N+Y+ TCP +   VK AV +   +      + LR+ FHDCFV GCD S+ +   +    EK +  N + A  GF+ V   K+ VE  CPGVVSCADILA+AAR  V ++GGP + V+LGRRD    S A+  +G +P P   +  L+  F + GLS  DM+ALS AHTIG + C
Sbjct:   12 MMMWFLGMLLFSMVAESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDG-LVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHC 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.493e-35
Identity = 81/182 (44.51%), Postives = 108/182 (59.34%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCIA 658
            SSA LS NFY+ +C      V++ V+SA S +  +   LLRL FHDCFV GCD S+L+   S+    + S P   S  GF V+D  K+ +E +CP  VSCADI+A+AAR +V   GGP   +  GRRD K +  A     +I     TL  +I+ F +KGLS +D+V LS AHTIG + C A
Sbjct:   25 SSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNST----EKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNII-DTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNA 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 4.344e-35
Identity = 71/176 (40.34%), Postives = 111/176 (63.07%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L  ++Y ++CP     +  A++   +    +   ++RL FHDCF+ GCD S+LLD   + T EK + PN+ S +GF+V+D +KS++E VCPGVVSCAD+L +AAR +V + GGP + ++ GR+DS  A    A    +P P +TLS ++ RF  +G + ++ V+L  AH+IG   C
Sbjct:   68 LHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEH-ELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHC 241          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.673e-35
Identity = 79/176 (44.89%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            LS N+Y + CP     V + V+     +  +G +LLRL FHDC V GCD S+LLD    + G +   P   + RGFE++DDIKS++EK CPG VSCADIL  A+R +   LGGP W    GRRDSK +   A +   +P     ++ L+  FQ+ GL+  D+V LS AHTIG+A C
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLD----YEGTERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHS--YARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASC 220          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.156e-34
Identity = 87/199 (43.72%), Postives = 122/199 (61.31%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSA-RGFEVVDDIKSKVEKV--CPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L++ L+L FL +    SSAQL  +FY+ TCP +   V++AVQ  + +      + LRL+FHDCFVNGCD S+++  T++   EK    N++ A  GF+ V   K  V+ V  C   VSCADIL +A R  V + GGP + V+LGRRD  ++S A++ +G +P PT  L+ L   F   GLS  DM+ALS AHT+G A C
Sbjct:   10 LLLILSL-FLAI--NLSSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSS-ASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.816e-34
Identity = 76/172 (44.19%), Postives = 105/172 (61.05%), Query Frame = 2
Query:  137 FYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            FY   C  + + V+S VQS V         +LR+HFHDCFV+GCDGS+LL   +  T E+T+ PN  S RGFEV+++ K+++EK CP  VSCADIL +AAR +V + GG  W V LGR D + +  +  N   +P P+ +++     F AK L+  D+V L   HTIG A C
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTSERTAVPN-RSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVN---LPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGC 205          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER62_ARATH3.553e-3743.22Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER2_MAIZE3.553e-3746.37Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER1_SORBI7.916e-3746.24Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER18_ARATH5.131e-3642.79Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER55_ARATH6.701e-3643.65Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER46_ARATH1.493e-3544.51Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER48_ARATH4.344e-3540.34Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER7_ARATH5.673e-3544.89Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER51_ARATH2.156e-3443.72Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER69_ARATH2.816e-3444.19Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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