CF835869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.790e-51 Identity = 103/212 (48.58%), Postives = 137/212 (64.62%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 PV V VTGAAGQI Y L+ IA G MLG P+ L +L+IP A +L GV MEL D AFPL+ + + D G N+A++VG PR GMER D+++ N I+ Q A+ AA + KVLVV NPANTNA I AP +PA+ T +TRLDHNRA+ Q+++K +++ + +WGNHS++QYPD+ HATV AG +P RELV + Sbjct: 9 PVTVTVTGAAGQIAYGLLFRIASGAMLGPHTPIRLRLLEIPAAVASLEGVAMELEDGAFPLLDAIDISDDPWTGFAGANVALLVGARPRTAGMERADLLAANGPIFTDQGQAINAVAADDVKVLVVGNPANTNAFIAMSNAPDVPAERFTAMTRLDHNRAIAQLAKKTGAPATEIHRIAVWGNHSATQYPDLTHATV---AG-RPARELVDE 216
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.868e-51 Identity = 107/216 (49.54%), Postives = 144/216 (66.67%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFP + GV DA + GVN+A++VG PR GMER D++S N +I+ AQ AL + AA + ++ V NPANTNALI AP IP + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPDV HA + G + E+V D Sbjct: 1 MSSTPLKVAVTGAAGQIGYSLLFRLASGSLLG-DRPIELRLLEITPALKALEGVVMELDDCAFPNLAGVQIGDDAEQIFDGVNLALLVGARPRGPGMERGDLLSANGAIFTAQGKALNKVAADDVRIGVTGNPANTNALIAMTNAPDIPQARFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDVFHAEI----GGRNAAEVVGD 211
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.158e-50 Identity = 100/202 (49.50%), Postives = 128/202 (63.37%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG 695 P V VTGAAG IGYA + IA G MLG D P+ L +L+IPPA A G MEL D+AFPL+ V D G ++A+++G PR +GMER D+++ N I+ Q A+ Q AA +VLVV NPANTNAL+ AP +PA+ T LTRLDHNRA+ Q++ V D+ V IWGNHSS+QYPD+ HA V +G Sbjct: 7 PAVVTVTGAAGSIGYAALFRIAAGAMLGPDTPIRLRLLEIPPAVSAAEGTAMELDDSAFPLLLDVEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRAINQVAADGVRVLVVGNPANTNALVAANNAPDVPAERFTALTRLDHNRAIAQLARHSGAAVRDISRVTIWGNHSSTQYPDIFHARVGDRSG 208
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50 Identity = 106/216 (49.07%), Postives = 142/216 (65.74%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AF L+ GV D + GVN+A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D++ + IWGNHS++QYPDV HA + G K E+V D Sbjct: 1 MSPRPLKVAVTGAAGQIGYSLLFRLASGSLLGLDRPIELRLLEIEPALKALEGVVMELDDCAFLLLAGVEIGADPNKVFDGVNLALLVGARPRGPGMERGDLLEANGAIFTAQGKALNAVAAADIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAIAQLATKTGSAVTDIRKMTIWGNHSATQYPDVFHAEI----GGKNAAEVVGD 212
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_RHOSR (Malate dehydrogenase OS=Rhodococcus sp. (strain RHA1) GN=mdh PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.976e-50 Identity = 100/202 (49.50%), Postives = 129/202 (63.86%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG 695 P V VTGAAG IGYA + IA G MLG D P+ L +L+IP A A G MEL D+AFPL++ + D G ++A+++G PR +GMER D+++ N I+ Q AL Q AA +VLVV NPANTNAL+ AP IPA+ T LTRLDHNRA+ Q++ V D++ V IWGNHSS+QYPD+ HA V +G Sbjct: 7 PAVVTVTGAAGSIGYASLFRIAAGEMLGPDTPIRLRLLEIPSAVSAAEGTAMELDDSAFPLLRDIEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRALNQVAADGVRVLVVGNPANTNALVAANNAPDIPAERFTALTRLDHNRAIAQLARHSGAAVKDIRRVAIWGNHSSTQYPDIFHARVGDRSG 208
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_XYLFA (Malate dehydrogenase OS=Xylella fastidiosa GN=mdh PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50 Identity = 108/216 (50.00%), Postives = 142/216 (65.74%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A ++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD AT A P+ E + D Sbjct: 2 KSLVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVGTDNPDIAFKDADVALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAIND 213
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_POLNA (Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50 Identity = 106/218 (48.62%), Postives = 144/218 (66.06%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P +AL GV MEL D AFPL+ + A +D + A + A++VG PR GMER ++++ N +I+ AQ AL A+ + +VLVV NPANTNA I + AP +PAKN T + RLDHNRA QI+ K V+D++ + +WGNHS + Y D AT+ G + V +++ D Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMELDDCAFPLLVEMTAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRDVRVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLTVWGNHSPTMYADYRFATI----GGESVAQMIND 214
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50 Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 3 Query: 96 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD 728 +V VTGAAGQI Y+L+ IA G + GTD PV L +L+IP A GV MEL+D+AFPL++ + T DA EA G N A +VG PR +G ER D+++ N I+ Q A+ +AA + +VLVV NPANTNALI AP +PA + RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD+ +ATV GEK V +LV D Sbjct: 11 KVTVTGAAGQISYSLLWRIANGEVFGTDTPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPDITYATV---GGEK-VTDLVDHD 217
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50 Identity = 99/202 (49.01%), Postives = 126/202 (62.38%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG 695 PV V VTGAAG IGYA + IA G MLG PV L +L++P A A GV MEL D AFPL+ G D A GV++A+++G PR +GMER D++ N I+ AL A+P+ +VLVV NPANTNAL+ AP IPA T LTRLDHNRA+ + V V+++ + IWGNHS +QYPD+ HA V +G Sbjct: 8 PVTVAVTGAAGHIGYAALFRIAAGAMLGHTTPVTLRLLELPDAVRAAEGVVMELEDGAFPLLAGTEIYDDPTRAFDGVDVALLIGARPRTKGMERADLLGANAEIFATSGKALNAGASPDVRVLVVGNPANTNALVASAHAPDIPADRFTALTRLDHNRAVAATARHSGVPVTEISRMTIWGNHSPTQYPDIFHAVVGGRSG 209
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.805e-50 Identity = 101/211 (47.87%), Postives = 139/211 (65.88%), Query Frame = 3 Query: 96 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD 728 +V VTGAAGQI Y+L+ IA G + GT+ PV L +L+IP A GV MEL+D+AFPL++ + T DA EA G N A +VG PR +G ER D+++ N I+ Q A+ +AA + +VLVV NPANTNALI AP +PA + RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD+ +ATV GEK V +LV D Sbjct: 11 KVTVTGAAGQISYSLLWRIANGEVFGTETPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPDITYATV---GGEK-VTDLVDHD 217 The following BLAST results are available for this feature:
BLAST of CF835869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835869 ID=CF835869; Name=CF835869; organism=Citrus sinensis; type=EST; length=730bpback to top |