CF835869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.156e-58 Identity = 116/212 (54.72%), Postives = 147/212 (69.34%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRE 713 MAK PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+IP A +A G MEL D AFPL+ GV D +A GVN+A++VG PR +GMER+D++ N I+ Q +A+ AA + +VLVV NPANTNALI + AP IPA T +TRLDHNRAL Q++ KLNV VSD+K + IWGNHS++QYPD+ HA VN + + V + Sbjct: 1 MAKAPVNVTVTGAAGQIGYALLFRIASGQLLGVDTPVRLRLLEIPQAIKAAEGTAMELDDCAFPLLAGVDIYDDPRKAFDGVNVALLVGARPRTKGMERRDLLEANGGIFGPQGAAINDGAADDVRVLVVGNPANTNALIAQAHAPDIPADRFTAMTRLDHNRALSQLAAKLNVSVSDIKKLTIWGNHSATQYPDIFHAEVNGRSAVEAVND 212
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.509e-58 Identity = 117/216 (54.17%), Postives = 146/216 (67.59%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGE---KPVRELVKDD 728 P++VLVTGAAGQI Y+L+ MIA G M G QPVILH+LDIP A+AL GV MEL D ++PL++ VVATTD A +N+A++VG FPR GM+RKD++ NVSI+K Q AL ++A+ KVLVV NPANTNAL A +P N + LTRLD NRA ISEK+ V +V NVIIWGNHS +Q PDVNH + +P+ V DD Sbjct: 61 PIKVLVTGAAGQIAYSLMFMIASGQMFGPHQPVILHLLDIPKMADALKGVVMELQDCSYPLLQSVVATTDIQTAFLHINVAILVGAFPRGPGMQRKDLLKVNVSIFKEQGEALNKYASRGVKVLVVGNPANTNALTALMKASDLPTSNFSALTRLDQNRAQSMISEKVGTNVDNVHNVIIWGNHSQTQVPDVNHGYILNYPNRGLIEPIPSSVNDD 276
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 118/212 (55.66%), Postives = 149/212 (70.28%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+PVRV VTGAAG I YA++ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ GVV T DA A V+ A++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTNA+I + AP + +N T +TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD+ +TVN KP +LV Sbjct: 4 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNAVIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN----GKPALDLV 211
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 113/203 (55.67%), Postives = 143/203 (70.44%), Query Frame = 3 Query: 75 LMAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 + K PVRV VTGAAGQI Y+L+ IA G MLG DQPVIL +L+I PA EALNGV MEL D AFPL+ G+ T DA A + A++VG PR GMERKD++ N +I+ AQ A+ +A+ KVLVV NPANTNALI + AP I + T +TRLDHNRA+ Q++ KL V+DVK ++IWGNHSS+QYPD++H V+ Sbjct: 1 MFMKAPVRVAVTGAAGQISYSLLFRIASGDMLGKDQPVILQLLEITPALEALNGVIMELEDCAFPLVAGITGTDDANVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSAQGKAINDNASKGIKVLVVGNPANTNALIAQRNAPDIDPRQFTAMTRLDHNRAMAQLANKLGKTVNDVKKMLIWGNHSSTQYPDLHHCEVD 203
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 114/200 (57.00%), Postives = 144/200 (72.00%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAG I YA++ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ G+V T DA A V+ A++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTNALI + AP + +N T +TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD+ +TVN Sbjct: 4 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGIVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN 203
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_STRCO (Malate dehydrogenase OS=Streptomyces coelicolor GN=mdh PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 116/217 (53.46%), Postives = 148/217 (68.20%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD 728 M + PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+I PA +A G MEL D AFPL++G+ T D A G N+A++VG PR +GMER D++ N I+K Q A+ HAA + KVLVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++K V+D+K + IWGNHS++QYPD+ HATV AG K E V D+ Sbjct: 1 MTRTPVNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIEITDDPNVAFDGANVALLVGARPRTKGMERGDLLEANGGIFKPQGKAINDHAADDIKVLVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRALTQLAKKTGSTVADIKRLTIWGNHSATQYPDIFHATV---AG-KNAAETVNDE 213
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 110/202 (54.46%), Postives = 143/202 (70.79%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M + PV V VTGAAGQIGYAL+ IA G ++G D PV L +L+IP A +A G MEL D AFPL++G+ T DA A G N+A++VG PR +GMER D++ N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++KL V V+D+K + IWGNHS++QYPD+ HA VN Sbjct: 1 MTQAPVTVTVTGAAGQIGYALLFRIASGQLIGPDTPVRLRLLEIPQAVKAAEGTAMELDDCAFPLLQGIEVTDDARTAFDGTNVALLVGARPRTKGMERGDLLEANGGIFKPQGEAINAGAADDVRVLVVGNPANTNALIAQAHAPDVPAERFTAMTRLDHNRALTQLAQKLGVSVNDIKKLTIWGNHSATQYPDLFHAEVN 202
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57 Identity = 115/218 (52.75%), Postives = 150/218 (68.81%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 MAK P+RV VTGAAGQIGY+L+ IA G +LG DQPVIL +L+IP A +AL GV MEL D AFPL+ G+ A +D + A +++A++VG PR GMERKD++S N I+ AQ AL A KVLVV NPANTNA I + AP IPAKN T + RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD AT++ K V++ + D Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALTGVMMELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPDYRFATID----GKSVKDSIND 214
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57 Identity = 111/212 (52.36%), Postives = 152/212 (71.70%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 PVR+ VTGAAGQI Y+L+ IA G MLG++QPVIL +LDIP + + L+GV MEL D AFPL+ G++AT D + A +IA++VG PR++GMERKD++ N I++ Q L Q A + K+LVV NPANTN LI + AP +PA+N + + RLDHNRAL Q++ KLN VS++K +I+WGNHSS+Q+PD+ HA + G+ V L+KD Sbjct: 4 PVRITVTGAAGQISYSLLFRIAAGDMLGSNQPVILQLLDIPESRKILDGVVMELQDCAFPLLAGIIATHDPMMAFDQTDIAILVGARPRRKGMERKDLLQTNGEIFRNQGKILNQVAKRDAKILVVGNPANTNTLITMKNAPDLPAENFSGMLRLDHNRALSQVAMKLNQPVSNIKKMIVWGNHSSTQFPDLYHAEI----GDTKVINLIKD 211
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_RALEH (Malate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=mdh PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.341e-57 Identity = 113/216 (52.31%), Postives = 148/216 (68.52%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 MAK P+RV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++ N I+ Q AL++ A+ N KVLVV NPANTNA I + AP++P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +ATV+ K V++L+ D Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQQAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRNVKVLVVGNPANTNAYIAMKSAPNLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATVD----GKSVKDLIND 212 The following BLAST results are available for this feature:
BLAST of CF835869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835869 ID=CF835869; Name=CF835869; organism=Citrus sinensis; type=EST; length=730bpback to top |