CF835896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.837e-56 Identity = 104/162 (64.20%), Postives = 127/162 (78.40%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 533 L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.451e-55 Identity = 102/162 (62.96%), Postives = 126/162 (77.78%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 533 L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ +YRESKKID+HMYH +Y++ KGNVFKNKR+LME IHK KA++AR+K LSDQ EA+R+K Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSK 165
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.612e-54 Identity = 101/162 (62.35%), Postives = 125/162 (77.16%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 533 L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ +YRE+KKID+HMYH +Y++ KGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R K Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTK 165
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.782e-53 Identity = 100/166 (60.24%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 39 ILSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 536 ++SLKLQKRL+AS+LKCG+G+VW+DPNE+ +++MANSR N+R+L+ GFI+RKP +HSRSRAR AKR GRH G G R GTREARLP+KI KYRE+KKIDKH Y ++Y+K KGNVFKNKR L+E I KSK EK REK + DQ +A+R KN Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKN 166
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.412e-50 Identity = 94/164 (57.32%), Postives = 124/164 (75.61%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 536 +L+LQKRL+++VLKCG+ +VWLDPNEV+EIS ANSRQ+IR+LV DG IIRKP +HSR RAR +EA+RKGRH+GYGKR+GT AR+P K +YR++KK+DKH+YH++Y++ KGN FKNK+ L+E I K K E R K L+DQ +A+R KN Sbjct: 3 NLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKN 166
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.844e-50 Identity = 95/163 (58.28%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 533 +L+ QKRL+ASVLKCG+ KVW+DPNE++EIS ANSRQNIRKLVKDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ + KYRES KIDKH+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 3 NLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50 Identity = 93/163 (57.06%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 533 +L+ QKRL+ASVLKCG+ KVW+DPNE++EIS ANSRQN+RKL+KDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ + KYRES KIDKH+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 3 NLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46 Identity = 89/164 (54.27%), Postives = 121/164 (73.78%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 536 +L+ QKRL+ASV+ G+ KVWLDPNE +EI+ ANSR IRKLVK+G I++K +HS+SR R ++KR+GRHSGYGKRKGTREARLP+++ KYR++ KIDKH+YH +Y + KGN FK+KR L+E I ++KA+ REK L+++ EA+R KN Sbjct: 3 NLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKN 166
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_PYRHO (50S ribosomal protein L19e OS=Pyrococcus horikoshii GN=rpl19e PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.742e-27 Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 452 +LK+Q+R++A +LKCG +VW+DP +V+E++ A +R++IR+L+K+G I +KP + SR RAR E K+KGRH G G RKG + AR+ K K +E KKID+ Y +Y++ KG FKNK L Sbjct: 3 TLKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_PYRAB (50S ribosomal protein L19e OS=Pyrococcus abyssi GN=rpl19e PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27 Identity = 59/149 (39.60%), Postives = 90/149 (60.40%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAR 491 +LK+Q+R++A +LKCG ++W+DP V++++ A +R++IR+L+K+G I +KP K SR RAR E K+KGRH G G RKG + AR+ K K +E KKID+ Y +Y++ KG FK+K L + + K R Sbjct: 3 TLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151 The following BLAST results are available for this feature:
BLAST of CF835896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835896 ID=CF835896; Name=CF835896; organism=Citrus sinensis; type=EST; length=700bpback to top |