CF835896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_PYRFU (50S ribosomal protein L19e OS=Pyrococcus furiosus GN=rpl19e PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26 Identity = 54/136 (39.71%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 45 SLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 452 +LK+Q+R++A +LKCG ++W+DP +++++ A +R++I++L+K+G I +KP K SR RA+ E K+KGRH G G RKG + AR+ K K + KKID+ Y +Y++ KG FKNK L Sbjct: 3 TLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARR 233 LKLQKRL+AS LKCG+GKVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KIHSRSR ++ Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRCKK 62
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_ARCFU (50S ribosomal protein L19e OS=Archaeoglobus fulgidus GN=rpl19e PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 39 ILSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN 440 ++ L LQ+RL+ASVLKCG +VW DP + +I+ A ++Q+IR+L++ G I RKP SR+R + K KRKGR G+G RKG + AR+P K + + +D+ Y +Y K KG F++ Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_METJA (50S ribosomal protein L19e OS=Methanocaldococcus jannaschii GN=rpl19e PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22 Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 39 ILSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 443 I+ + +Q+R++A +LKCG +VW+DP +++ + MA S+ +IR L+K+G I +K K S +R +++KE ++KGR G G R+G AR P K + R+S KID+ +Y +Y KG F+++ Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_METTH (50S ribosomal protein L19e OS=Methanobacterium thermoautotrophicum GN=rpl19e PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 48/134 (35.82%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 42 LSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 443 ++L QKRL+A +LK G ++W+DP ++E+S A +R +++L+KDG I KP K S R++++ + K+KGR G G KG + AR P K + R++++I+K Y +Y KG FK+K Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_METVA (50S ribosomal protein L19e OS=Methanococcus vannielii GN=rpl19e PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 45/134 (33.58%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 42 LSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 443 + + Q+R++A+VL CG +VW+DP + ++ MA ++ +IR L+ DG I++K K S +R + ++E KRKG+ G G R+G + AR P K + RE++KI++ Y +Y KG F+++ Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19E_HALSA (50S ribosomal protein L19e OS=Halobacterium salinarium GN=rpl19e PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 47/142 (33.10%), Postives = 68/142 (47.89%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKS 473 L QKRL+A VL G +VW DP+ +EI+ A +R++IR+LV DG I + T+ +SR RAR + G G G RKG AR K + R+ + Y +MY G F + R L + ++ Sbjct: 4 LSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMYNMANGGEFDSVRRLTNYVEEN 145
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_HALMA (50S ribosomal protein L19e OS=Haloarcula marismortui GN=rpl19e PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13 Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVF 434 L QKRL+A VL G+ +VW +P +I+ A +R+++R+LV +G I K K +SR RAR ++ + G G G RKG AR +K + R+ + Y D+Y K G F Sbjct: 4 LSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEF 132
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_SULAC (50S ribosomal protein L19e OS=Sulfolobus acidocaldarius GN=rpl19e PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 3 Query: 51 KLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKR-KGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN----KRVLMESIHK 470 +LQ+RL+A + G + +P + E+ A +R++I+KL+K+ +I P + S R + K +R KG +G RKG AR K R++ IDKH Y +Y + KGN FKN K L + HK Sbjct: 5 QLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHK 149
BLAST of CF835896 vs. ExPASy Swiss-Prot
Match: RL19_AERPE (50S ribosomal protein L19e OS=Aeropyrum pernix GN=rpl19e PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 41/135 (30.37%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 42 LSLKLQKRLSASVLKCGRGKVWL--DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN 440 + + Q+RL+A +L G ++W+ DP EI A ++ ++R L+K G I P K ++ ++ +RKGR G G+RKG ARL K R+ + ID+ Y +YM KG F++ Sbjct: 1 MDYRFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135 The following BLAST results are available for this feature:
BLAST of CF835896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835896 ID=CF835896; Name=CF835896; organism=Citrus sinensis; type=EST; length=700bpback to top |