CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_POLNA (Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R S A AA+ A DH+RDW GT G WV+ G G Y +P ++ FPVT NGE+ I +GL ID FS++++++T EL EKA Sbjct: 233 IIEARGSSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSGGEYGIPAETMFGFPVTCENGEYKIVEGLEIDAFSQERINITLAELEGEKA 322
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15 Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDWV G+ G V+ G +G Y +P V++ FPVT+ NG++ + +G +D +SR+K+++T +EL EE+A Sbjct: 233 IIEARGLSSAASAANAAIDHVRDWVLGS-NGKIVTMGIPSNGDYEIPQDVMFGFPVTTANGKYEVVKGFEVDAYSREKINITLKELEEERA 322
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_CUPTR (Malate dehydrogenase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=mdh PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15 Identity = 41/91 (45.05%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDWV G+ G V+ G +G Y +P ++ +PVT+ NG++ I +GL ID +S++K+++T +EL EEKA Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGS-NGKVVTMGIPSNGEYGIPADTMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLKELEEEKA 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIAC (Malate dehydrogenase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=mdh PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.256e-15 Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDW G+ G WV+ G G Y +P G+++ FPV + NGE+ I +GL ID FS+++++ T EL E+ Sbjct: 233 IIEARGLSSAASAANAAIDHMRDWALGS-NGKWVTMGVPSKGEYGIPEGIVFGFPVITENGEYKIVEGLEIDAFSQERINKTLAELQGEQ 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_RALME (Malate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=mdh PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.025e-15 Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+ DWV G+ G V+ G +G Y +P V++ +PVT+ NG++ I +GL ID +S++K+++T +EL EE+A Sbjct: 231 IIEARGLSSAASAANAAIDHVHDWVLGS-NGKVVTMGIPSNGEYGIPNDVMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLKELEEERA 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_RALEJ (Malate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=mdh PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.025e-15 Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+ DWV GT G V+ G +G Y +P ++ +PVT NG++ I +GL ID +S++K+++T EL EEKA Sbjct: 231 IIEARGLSSAASAANAAIDHVHDWVLGT-NGKVVTMGIPSNGEYGIPADTMFGYPVTCANGKYEIVKGLEIDAYSQEKINITLNELEEEKA 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.571e-15 Identity = 42/90 (46.67%), Postives = 56/90 (62.22%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDW GT G WV+ G +G Y +P V++ FPVT NGE+ I GL ID FS++ ++ T EL E+ Sbjct: 233 IIEARGLSSAASAANAAIDHMRDWALGT-NGAWVTMGVPSNGEYGIPKDVMFGFPVTCANGEYKIVDGLAIDAFSQECINKTLAELQGEQ 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.119e-14 Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AA+ A DHI DWV GTP+G W S G+Y V G++ SFP S G W I +GL I+ FSR ++D + EL E+ Sbjct: 234 IIEARGASSAASAANGAIDHIDDWVHGTPDGDWTSVALPSPGAYGVDEGLVCSFPCRSVGGRWEIVEGLDINPFSRARIDASVAELRTER 323
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_COREF (Malate dehydrogenase OS=Corynebacterium efficiens GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.119e-14 Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DH+RDW+ GT W S G+Y +P G+I P SRNGEW + +GL I++F R ++D EEL E+ Sbjct: 229 IIEVRGKSSAASAASSAVDHMRDWIQGTET--WASAAIPSTGAYGIPEGIILGLPTVSRNGEWEVVEGLEINDFQRARIDANVEELQGER 316
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.494e-14 Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II R +S A AA+ A DH+RDW GT G WV+ G DG Y +P ++ FPVT GE+ + Q L ID FS++ ++ T +EL +E+A Sbjct: 233 IIAARGVSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGQYGIPKETMFGFPVTCEGGEYKVVQNLPIDAFSQECINKTLKELQDEQA 322 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |