CF835933

Overview
NameCF835933
Unique NameCF835933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = -3
Query:  495 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 728
            E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PV    CP+R    N   DG M    ++    +Y+P+ +
Sbjct:  330 EQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPV---NCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = -3
Query:  549 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDG 728
            E  AF P  +VPGI  S D+MLQ R+F Y D QR+RLG NY  +PV  P+CP  +N  DG
Sbjct:  318 EQSAFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDG 377          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = -3
Query:  495 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 728
            E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PV    CP R    N   DG M  + ++    +Y+P+ +
Sbjct:  330 EQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPV---NCPFRARVANYQRDGPMCMLDNQGGAPNYYPNSF 409          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = -3
Query:  480 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTCH 728
            E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLGPNYL +PV    CP+R    N   DG M    ++    +Y+P+ +    H
Sbjct:  330 EQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPV---NCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEH 414          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = -3
Query:  342 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAE----RYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERFLN 728
            E +AF    VV GI +S+D +LQ R F+Y DTQ  RLG N+  LP+  P CP  N + DG M        V+Y+P+R+D    A      Y   +  + G + +A   K + +F Q    Y S +P  ++  +N
Sbjct:  351 EQIAFCTSHVVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEGGYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMIN 484          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 51/168 (30.36%), Postives = 78/168 (46.43%), Query Frame = -3
Query:  240 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPI----PSDVITGRREKACIEKENNFKQPGERYRSWAPDRQ-ERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKL 728
            E  AF+P   VPGI  S D+ML  R FAY D Q +R+G +   LPV  PK    N  ++G M + H  +   Y P+    +   E  P+     +D    R  +A    +++F Q G   R    D++ + F+     AL    V  +V +    YW   D ++GQ++
Sbjct:  315 ESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGAL--KGVRQDVQARAFEYWKNVDATIGQRI 480          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = -3
Query:  381 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHA-----ERYPIPSDVITGRREKACIEKENNFKQPGERY 728
            E +AF    +VPGI +S+D +LQ R F+Y DTQ  RLG N+  +P+  P CP  N++ DG          V+Y+P+R++    A     + +P P   ITGR+ +    K   +    + +
Sbjct:  352 EQVAFCTSHIVPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDGAKRHRITKGTVNYWPNRFEANPPASDKGFKSHPAP---ITGRKRRDLTPKFKEYHNQAQLF 469          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = -3
Query:  567 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHR 728
            E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PV    CP+R
Sbjct:  330 EQIAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPV---NCPYR 380          
The following BLAST results are available for this feature:
BLAST of CF835933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
CATA_HUMAN5.260e-1146.99Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATA_HAEIN5.260e-1153.33Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_CANFA5.260e-1146.99Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_CALJA5.260e-1144.32Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CAT1_NEUCR5.260e-1134.33Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATA_MICLU6.869e-1130.36Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CATA_EMENI6.869e-1133.06Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_CAVPO6.869e-1161.11Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835933 ID=CF835933; Name=CF835933; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTTTTTTTTTTTTCTAAAACAGACTTTTATTAATTGACCCTCAGGA
AAAGAGTCACATAACATGCAAGTTTATTTTCTCTATTACAATATACAACA
GCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGGGTTCACT
CCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTG
ACACCTTCAAATGCTTGGCCTCACATTGAGACAAGAAGCTAGCTTCTGAC
CCAAAGATCTGTCGGCCTGAAACCAGTAAGAGACCCATATGCTGCCAACC
TCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAA
CCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCT
TGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATT
ACATCAGAAGGAATGGGATATCTCTCAGCATGACAAGTAGGATCATACCT
CGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAAC
CATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATAAACTGGAAGC
ATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAA
GATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCA
CGATACCAGGGTTAAATGCAAGCATTTCAT
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