CF835933

Overview
NameCF835933
Unique NameCF835933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = -3
Query:  222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-DPTCHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728
            E  AF P  +VPG+  S D+MLQ R+FAY D  R+R+G N+  LPV AP+ P  +   DG M F  +     +Y P+ Y D    A +Y  P+  ++G  ++    ++ + +   G  +R    +++   +N    A+    V+ +V    + Y+F+AD + G+ +AS L V
Sbjct:  310 EQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNSYQRDGSMAFGSNGGAAPNYEPNSYADAPKQAPQYAEPALALSGAADRYDHREDTDYYSHAGALFRLMNDEQKALLINNIAGAMAG--VSSDVVQRQLQYFFKADPAYGEGIASALGV 479          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.695e-15
Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = -3
Query:  222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS-----RYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728
            E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PV  PK       CP      DG M F+  ++     Y+P+     +  P      +P+  D   G       + +N F+QPG+ +R  + D +ER       A+    V+ +V    + + ++AD   G+ +A  L +
Sbjct:  311 EQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENMCPFSR---DGQMRFLDGNQGGGPHYYPNNKGVYQSQPEYKKPAFPVDGD---GYEYNQRQDDDNYFEQPGKLFRLQSDDAKERIFTNTANAM--DGVSEDVKHRHIRHCYKADPEYGKGVAKALEI 485          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15
Identity = 55/180 (30.56%), Postives = 90/180 (50.00%), Query Frame = -3
Query:  222 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTCHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNV 728
            E  AF P  +VPG+ +S DKMLQ R+F+YGDTQR+RLG N+  +PV  PK       CP      DG M  +  ++     Y+P+         +Y  P+  I G+  +     + +N F+QPG+ +R  + + Q+   N     +    VT  +    + + ++AD + GQ +A  + +
Sbjct:  308 EQAAFAPTNIVPGLDFSPDKMLQGRLFSYGDTQRYRLGVNHWQIPVNQPKGVGMENICPFSR---DGHMRILDNNQGASTHYYPNSNGAFEDQPQYKKPALDIQGQAYEYDFREDDDNYFEQPGKLFRLLSSEEQQILFNNTANEMSP--VTDALKHRHIRHCYKADPAYGQGVAEAMGI 482          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 52/173 (30.06%), Postives = 82/173 (47.40%), Query Frame = -3
Query:  228 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSD------VITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCL 728
            E  +F  G++V G+ +S+DK+LQ R FAY DTQR+R+G NYL LP+ +PK     N   G M +     E       Y+P+          D       + G  ++  I++ NNF Q GE YR +    +   +   +  L   R   E+    +  + +AD   G+++A  L
Sbjct:  343 EQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQAGETYRRFTEFERNELITNLVNTLSTCR--KEIQDQMIENFTKADPDYGKRVAEGL 513          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 55/168 (32.74%), Postives = 83/168 (49.40%), Query Frame = -3
Query:  219 LAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVR 722
            LAF+P  +VPGI  S DK+LQ R+F Y D +R+RLG NY  LPV  PK P  N   DG M   ++   V+Y P+  D         I  D ++G       + +  +   G+ YR  + D Q R +   I+         E+    V  ++QAD   G+++A+ + +R
Sbjct:  310 LAFSPANLVPGIEASPDKLLQGRLFGYKDAERYRLGANYEQLPVNRPKVPVHNYERDGAM-AQNQATGVNYEPNSQDGPTEVPAAKIHGDQLSGTTGNFSADPD-YYSAAGKLYRLLSADEQTRLIEN-IRMNLGQVTKPEIQIREVKQFYQADPEYGRRVATSVKLR 474          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15
Identity = 50/132 (37.88%), Postives = 66/132 (50.00%), Query Frame = -3
Query:  339 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYRSWAPDRQERFLNR 728
            E  AF+P  +VPGI +S DKMLQ R+F+YGD  R+RLG N+  +PV APKCP  N H DG M    +    + Y P+          +  P   I G  +     E E+ F QP   Y   + D  +R   R
Sbjct:  309 EQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFAR 440          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = -3
Query:  219 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYD---PTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVR 728
            E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PV AP+CP  + H DG      +    ++Y P+ +       HA   P+  D     R    ++ E+ + QPG  +R    D++++      + +    V  E+    + ++ +AD +    +A  L ++
Sbjct:  312 EQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVD-EDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = -3
Query:  219 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYD---PTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVR 728
            E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PV AP+CP  + H DG      +    ++Y P+ +       HA   P+  D     R    ++ E+ + QPG  +R    D++++      + +    V  E+    + ++ +AD +    +A  L ++
Sbjct:  312 EQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVD-EDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = -3
Query:  219 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYD---PTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVR 728
            E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PV AP+CP  + H DG      +    ++Y P+ +       HA   P+  D     R    ++ E+ + QPG  +R    D++++      + +    V  E+    + ++ +AD +    +A  L ++
Sbjct:  312 EQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVD-EDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14
Identity = 49/173 (28.32%), Postives = 87/173 (50.29%), Query Frame = -3
Query:  219 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVR 728
            E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PV A +CPH+  H DG M     +  + V Y P+ ++       +  P   + G  +      +++ + QP   +  +  ++++R      + + D  V  ++    +  + + D + G+ +A  L ++
Sbjct:  310 EQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRD--VPEQIQRRQIGLFLKVDPAYGKGVADALGLK 480          
The following BLAST results are available for this feature:
BLAST of CF835933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
CATA_ONCVE2.064e-1531.40Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATA_STAHJ2.695e-1530.60Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_STAXY3.520e-1530.56Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATX_BACSU4.597e-1530.06Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_LACSK4.597e-1532.74Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATA_PROMI6.004e-1537.88Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_BORPE7.841e-1531.03Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA7.841e-1531.03Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR7.841e-1531.03Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_PSEAE2.282e-1428.32Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835933 ID=CF835933; Name=CF835933; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTTTTTTTTTTTTCTAAAACAGACTTTTATTAATTGACCCTCAGGA
AAAGAGTCACATAACATGCAAGTTTATTTTCTCTATTACAATATACAACA
GCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGGGTTCACT
CCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTG
ACACCTTCAAATGCTTGGCCTCACATTGAGACAAGAAGCTAGCTTCTGAC
CCAAAGATCTGTCGGCCTGAAACCAGTAAGAGACCCATATGCTGCCAACC
TCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAA
CCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCT
TGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATT
ACATCAGAAGGAATGGGATATCTCTCAGCATGACAAGTAGGATCATACCT
CGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAAC
CATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATAAACTGGAAGC
ATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAA
GATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCA
CGATACCAGGGTTAAATGCAAGCATTTCAT
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