CF835934

Overview
NameCF835934
Unique NameCF835934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 7.848e-106
Identity = 179/226 (79.20%), Postives = 200/226 (88.50%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+  N+PF TTN+GAPV+N+N SLTVG+RGPVLLEDYHLVEKLA+F RERI ERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WR+LDF SH PESL  F++ FDD+GIPQDYRHM+G G  TFTL+N+ GK  YVKFHW
Sbjct:    1 MDPYKYRPSSAFNSPFCTTNSGAPVFNNNSSLTVGARGPVLLEDYHLVEKLANFDRERIAERVVHARGASAKGFFEVTHDIAHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRVLDFFSHHPESLHMFTFLFDDIGIPQDYRHMDGSGVHTFTLINRAGKSTYVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 2.284e-105
Identity = 176/226 (77.88%), Postives = 201/226 (88.94%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+PK+++QE WRI+DF SH PESL  FS+ FDDVGIP +YRHMEGFG  T+TL+NK+GK H VKFHW
Sbjct:    1 MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRIVDFFSHHPESLHMFSFLFDDVGIPLNYRHMEGFGVNTYTLINKDGKPHLVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 381.719 bits (979), Expect = 2.284e-105
Identity = 176/226 (77.88%), Postives = 201/226 (88.94%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+PK+++QE WRI+DF SH PESL  FS+ FDDVGIP +YRHMEGFG  T+TL+NK+GK H VKFHW
Sbjct:    1 MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRIVDFFSHHPESLHMFSFLFDDVGIPLNYRHMEGFGVNTYTLINKDGKPHLVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 2.982e-105
Identity = 176/226 (77.88%), Postives = 201/226 (88.94%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK   S+ +NAPF TTN+GAPV+N+N+SLTVGSRGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI+ LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++H+ KPNPKSHIQE WRI+DF SH PESL  F++  DD+G+PQDYRHM+G G  T+TL+NK GK +YVKFHW
Sbjct:    1 MDPYKYRSSSAYNAPFWTTNSGAPVYNNNNSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITALTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHSLKPNPKSHIQEDWRIMDFFSHHPESLHMFTFLLDDIGVPQDYRHMDGSGVNTYTLINKAGKAYYVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 5.087e-105
Identity = 177/226 (78.32%), Postives = 198/226 (87.61%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPY+  PS+  NAPF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI++L+CAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KF   +H  KPNPKSHIQE WRILDF SH PESL+ FS+ FDD+GIPQDYRHM+G G  T+TL+NK GK HYVKFHW
Sbjct:    1 MDPYRHRPSSAFNAPFWTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITNLSCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFTRHVHPLKPNPKSHIQENWRILDFFSHHPESLNMFSFLFDDIGIPQDYRHMDGSGVNTYTLINKAGKAHYVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 8.677e-105
Identity = 173/226 (76.55%), Postives = 201/226 (88.94%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+  N+ F TTN+GAPVWN+N +LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKPNPK+++QE WRI+DF SH PESL  F++ FDDVGIP +YRHMEGFG  T++L+N++GK H VKFHW
Sbjct:    1 MDPYKHRPSSGSNSSFWTTNSGAPVWNNNSALTVGQRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPNPKTNLQENWRIVDFFSHHPESLHMFTFLFDDVGIPLNYRHMEGFGVNTYSLINRDGKPHLVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 379.407 bits (973), Expect = 1.133e-104
Identity = 176/226 (77.88%), Postives = 199/226 (88.05%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+ +NAPF TTN GAPV N+  SLT+G RGPVLLEDYHL+EK+A+F RERIPERVVHARG SAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTV+HER SPET+RD RGFAVKFYTREGN+DL+GN+ PVFFIRD I+FPDV+HA KPNPK++IQEYWRILD+ SHLPESL T+ W FDDVGIPQDYRHMEGFG  T+TL+ K+GKV +VKFHW
Sbjct:    1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHW 226          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.525e-104
Identity = 175/219 (79.91%), Postives = 197/219 (89.95%), Query Frame = 2
Query:   95 PSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            PS+  N+PF TTN+GAPV+N+N SLTVG+RGPVLLEDYHLVEKLA+F RER+PERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KFPD++HA KPNPKSHIQE WR+LDF SH+PESL  F++ FDD+GIPQDYRHM+G G  TFTL+NK GK  YVKFHW
Sbjct:    1 PSSAFNSPFCTTNSGAPVFNNNSSLTVGARGPVLLEDYHLVEKLANFDRERVPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRVLDFFSHVPESLHMFTFLFDDIGIPQDYRHMDGSGVHTFTLINKAGKSTYVKFHW 219          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 377.481 bits (968), Expect = 4.306e-104
Identity = 177/226 (78.32%), Postives = 198/226 (87.61%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+  NAP+ TTN+GAPVWN++ SLTVG+RGP+LLEDYH  EKLA+F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDL+GN+ PVFFIRD IKFPD++HA KPNP++HIQ+ WRILDF SH PESL  FS+ FDDVGIP DYRHM+G G  T+TLV++ G V YVKFHW
Sbjct:    1 MDPYKHRPSSAFNAPYWTTNSGAPVWNNDSSLTVGARGPILLEDYHC-EKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLVGNNFPVFFIRDGIKFPDMVHALKPNPRTHIQDNWRILDFFSHHPESLHMFSFLFDDVGIPADYRHMDGSGVHTYTLVSRAGTVTYVKFHW 225          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 5.624e-104
Identity = 171/226 (75.66%), Postives = 198/226 (87.61%), Query Frame = 2
Query:   74 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            MDPYK  PS+ +N PF TTN+GAP+WN+   ++VG RGP+LLEDY L+EK+A F RERIPERVVH RGASAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RDA++FPDVI AFKPNPKSH+QE WR LDFCS+ PESL +F+WF+DDVGIP +YRHMEGFG Q ++L+NK+GK   VKFHW
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGERGPILLEDYQLIEKIATFTRERIPERVVHRRGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQEPWRYLDFCSYHPESLLSFAWFYDDVGIPINYRHMEGFGVQAYSLINKSGKARLVKFHW 226          
The following BLAST results are available for this feature:
BLAST of CF835934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA2_SOLLC7.848e-10679.20Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA2_ORYSJ2.284e-10577.88Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA2_ORYSI2.284e-10577.88Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA_HELAN2.982e-10577.88Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA1_CUCPE5.087e-10578.32Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA1_MAIZE8.677e-10576.55Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA3_ARATH1.133e-10477.88Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA1_NICPL2.525e-10479.91Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_MAIZE4.306e-10478.32Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA3_CUCPE5.624e-10475.66Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835934 ID=CF835934; Name=CF835934; organism=Citrus sinensis; type=EST; length=753bp
CTCGACTCAACTCCTCTTCTCCTTTCTTACGATAATAATAACAGTAGCAA
AATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCA
ACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTG
GAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTG
AGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATT
CCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGA
GTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTC
CAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAG
CGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTT
TTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTT
TTTTCATCCGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAA
CCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTG
CTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATG
TGGGTATTCCACAAGATTACAGGCACATGGAAGGCTTCGGTGATCAAACT
TTTACACTGGTCAATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTG
GAA
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