CF835934

Overview
NameCF835934
Unique NameCF835934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.073e-62
Identity = 115/213 (53.99%), Postives = 150/213 (70.42%), Query Frame = 2
Query:  113 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            A  +TT AG PV +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H++    + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+
Sbjct:   24 ADVLTTGAGNPVGDKLNVITAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKHPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHY 236          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.073e-62
Identity = 118/212 (55.66%), Postives = 149/212 (70.28%), Query Frame = 2
Query:  116 PF-MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFH 748
            PF +TT+ GAP++N   SLTVG RGP+LL+D   ++++AHF RERIPERVVHA+G  A GFFE T DI+    AD+F   G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH  K NP +H+++   + DF S  PE+       F D GIP  +RHM+GFG  TF LVNK+G   Y KFH
Sbjct:   23 PFVLTTSNGAPIFNKKASLTVGPRGPLLLQDVVFLDEMAHFDRERIPERVVHAKGGGAHGFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTHLKDPNMMWDFFSLRPETTHQVMILFGDRGIPDGFRHMDGFGSHTFKLVNKDGNAVYCKFH 234          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.402e-62
Identity = 115/209 (55.02%), Postives = 149/209 (71.29%), Query Frame = 2
Query:  125 TTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            TT  GAPVW+DN+ +T G RGPVLL+    +EKLA F RERIPERVVHA+G+ A G F  T DI+  T A +F   G +T    RFSTV  E+GS + +RDPRGFA+K+YT EGNWDL+GN+ PVFFIRDAIKFPD IH  K +P++++     + DF S++PESL   +W   D GIP+ +RHM+GFG  TF+L+N  G+  +VKFH+
Sbjct:    9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHF 217          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 1.830e-62
Identity = 112/210 (53.33%), Postives = 150/210 (71.43%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TT  G P+ +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   ++ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+
Sbjct:   27 LTTGGGNPIGDKLNIMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHY 236          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.830e-62
Identity = 115/210 (54.76%), Postives = 145/210 (69.05%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TTN G PV ++ +S+T G +GP LLEDY L+EKLAHF RER+PERVVHARGA A G F     +   T A+  +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +   + F D G P  YR + G     F  +N+ GK  YVK  W
Sbjct:    7 LTTNQGTPVGDNQNSMTAGLKGPTLLEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTIANFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLSPEATTMIMYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRW 216          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.391e-62
Identity = 114/210 (54.29%), Postives = 145/210 (69.05%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TTN G P+ ++ +S+T G +GP LLEDY L+EKLAHF RER+PERVVHARGA A G F     +   T A   +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +  ++ F D G P  YR + G     F  +N+ GK  YVK  W
Sbjct:    7 LTTNQGVPIGDNQNSMTAGLKGPTLLEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTKAQFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMITYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRW 216          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.122e-62
Identity = 114/210 (54.29%), Postives = 144/210 (68.57%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TTN G PV ++ +S+T G +GP L+EDY L+EKLAHF RER+PERVVHARGA A G F     +   T A   +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +   + F D G P  YR + G     F  +N+ GK  YVK  W
Sbjct:    7 LTTNQGVPVGDNQNSMTAGRKGPTLIEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMIMYLFSDEGTPASYREVRGSSVHAFKWINEEGKTVYVKLRW 216          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 238.424 bits (607), Expect = 3.122e-62
Identity = 118/235 (50.21%), Postives = 157/235 (66.81%), Query Frame = 2
Query:   53 SSARNIAMDPYKLLPS--TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            + +R+ A D  KL            +TT  G P+ +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN  G+  Y KFH+
Sbjct:    2 ADSRDPASDQMKLWKEQRAAQKPDVLTTGGGNPIGDKLNVMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNAAGEAVYCKFHY 236          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.550e-61
Identity = 118/221 (53.39%), Postives = 143/221 (64.71%), Query Frame = 2
Query:  110 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNP-------KSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            + P +TT  G PV +D +SL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFFE    ++  T ADLF+ PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGNWDL+GN+IPVFFI+DAIKFPDVIH+ KP P       +S    +W   DF S  PES+    W   D  IP+ +R MEGFG  TF  VN   +  +VKFHW
Sbjct:   36 DTPVLTTAQGGPVADDQNSLRAGERGPTLIEDFHFREKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEPDREFPQAQSAHDNFW---DFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVNAKDESTFVKFHW 253          
BLAST of CF835934 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.550e-61
Identity = 115/210 (54.76%), Postives = 148/210 (70.48%), Query Frame = 2
Query:  122 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGDQTFTLVNKNGKVHYVKFHW 751
            +TT +GAPV ++ +S + G RGP+LL+D+HL+EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF   G QT   +RFSTV  ERGS +T RDPRGFAVKFYT EGNWD++GN+ PVFFIRD +KFPD IH  K +P+S+++      D  SH PE+L   +  F D GIP  YRHM GFG  T++L+N  G+  +VK+H+
Sbjct:    5 LTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITGYTSAKLFEQVGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQIFWDSWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAQGERTWVKWHF 214          
The following BLAST results are available for this feature:
BLAST of CF835934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_CALJA1.073e-6253.99Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATA_ASCSU1.073e-6255.66Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_HELPJ1.402e-6255.02Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA_RAT1.830e-6253.33Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_LISIN1.830e-6254.76Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISSE2.391e-6254.29Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATA_LISMO3.122e-6254.29Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_CANFA3.122e-6250.21Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATE_RHIME1.550e-6153.39Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_PSEPU1.550e-6154.76Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835934 ID=CF835934; Name=CF835934; organism=Citrus sinensis; type=EST; length=753bp
CTCGACTCAACTCCTCTTCTCCTTTCTTACGATAATAATAACAGTAGCAA
AATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTCA
ACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCTG
GAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTG
AGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATT
CCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGA
GTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTC
CAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAG
CGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTT
TTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTT
TTTTCATCCGTGATGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAA
CCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTG
CTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATG
TGGGTATTCCACAAGATTACAGGCACATGGAAGGCTTCGGTGATCAAACT
TTTACACTGGTCAATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTG
GAA
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