CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CLOTH (Anthranilate phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpD PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.708e-39
Identity = 84/218 (38.53%), Postives = 130/218 (59.63%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 668
            ADVLEALGV IDLDP  V+ C+++ GIGF+ +  +H +MK     RK+L ++T+FNILGP+ NP+     V+GV+N NL   MAN L   G++RA+V+H  +G+DE++      + +V   ++  +   P +YGI   + E L GG    NA+++RR+ +GE+G               V   V+++ EG+ LA E+  SGKAL  LD ++E +   +
Sbjct:  121 ADVLEALGVNIDLDPVQVKECIEKVGIGFIYAPVFHKSMKHAAGPRKELGIRTIFNILGPLTNPSNAKGQVLGVFNPNLTELMANVLLNLGIERAMVIHGMDGMDEITTTTSTKVSEVRNNEVITYELFPENYGIALASPEDLTGGNAEENAQIIRRIFNGEKGPKRDIVVLNSAAALYVGKVVSSIEEGIGLAEEVIDSGKALQKLDEFVEFTNSFI 338          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METJA (Anthranilate phosphoribosyltransferase OS=Methanocaldococcus jannaschii GN=trpD PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.370e-38
Identity = 83/212 (39.15%), Postives = 129/212 (60.85%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGER-GXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 650
            ADVLEALGV +++  E V+  +++ GIGF+ +  +HPAMKF  PVRK+L ++TVFN+LGP+ NPA   + ++GVY+E L  K+AN L+  GLK ALVVH  G+DE++ +G   I ++   +I+ +  +P D+GI +  LE ++GG    NA+++  +  GE  G               ++ +   + EG+ LA +    GKAL  L+  IE
Sbjct:  120 ADVLEALGVNLNVPIERVKESIEKIGIGFLFAPHFHPAMKFATPVRKELGIRTVFNVLGPLTNPANANYQLMGVYDEKLTEKLANVLKNLGLKGALVVHGSGMDEITTIGKTKISELRNGEIKSYYIEPEDFGIKKAKLEDIRGGDAEENAKIIGEIFEGEEVGAKRDIVVLNAAFALYIAEEAKDVEEGIKLAEKSIDEGKALKKLEDLIE 331          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_AGRVS (Anthranilate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=trpD PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.370e-38
Identity = 86/213 (40.38%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            AD L ALGV +D+DP  + RC+ EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   ++GVY    V+ +A  L+  G +   VVH  GLDE++  G   +  + Q KI  F   P D+G+ +  L +L+GG   YNA+ LR VL GE+                ++ K NTLA+G+AL  +   SG AL  L+  I VS
Sbjct:  122 ADSLTALGVKLDIDPSVIGRCISEAGVGFMFAQLHHSAMRHVGPARVELGTRTIFNLLGPLANPAGVKKQLLGVYAPEWVIPLAETLRDLGSESIWVVHGNGLDEITTTGTTQVAALEQGKIRSFELTPGDFGVAQVELAALKGGDGEYNAKALRAVLEGEKNAYRDVALCNAAAALVIAGKANTLADGMALGAQSLDSGAALKRLETLITVS 334          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.789e-38
Identity = 88/219 (40.18%), Postives = 130/219 (59.36%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            SAC  ADVLE+LGV +D+  E + RC++E GIGF+ +   H AMK+    RK++ ++T+FNILGP+ NPA     V+GVY E+LV K+A+ L+  G KR  VVH  +G+DEM+      I +VT   +    F P + G+ RC ++ L+GG  A NA ++RRVL GE+G                + +V   A G+ +A E   SGKAL  L+  ++++
Sbjct:  130 SACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKYAIGPRKEIGIRTIFNILGPLTNPAGAGCQVLGVYREDLVEKLAHVLKNLGCKRGFVVHGQDGMDEMTLTAETRIAEVTPAGVATRLFRPEELGLSRCGMDDLRGGDAAANAVIVRRVLEGEKGPKRDIVLLNAAFGLVAAGRVVDPAAGLTMAAEAIDSGKALAQLEKLVKLT 348          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.789e-38
Identity = 89/208 (42.79%), Postives = 121/208 (58.17%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            ADVLEALGV IDLD +G  RCVDE GIGF+ +   HPAM+ V   R+++ V+TVFNILGP+ NPA +   V+GV+   L   +A  L   G++RA VVH   GLDE+S  GP  + ++ + KI+ + FDPL YG   C+L  LQGG    NA +L+ +L G+ G               ++  VN   E + +ARE    G A   L+
Sbjct:  121 ADVLEALGVNIDLDAKGTARCVDEIGIGFLFAPNLHPAMRHVAKTRREIGVRTVFNILGPLANPANIVGQVLGVFTPELQETLAKVLNNLGVERAFVVHGHGGLDEVSLTGPTRVFELNRGKIDSYLFDPLSYGFSYCSLRDLQGGDAFENARLLQEILDGKPG-PLRDVVLLNAAFGIMAGGVNDFREALVMARESIDKGLAAEKLE 327          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.052e-38
Identity = 85/213 (39.91%), Postives = 123/213 (57.75%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            SAC  ADVLE LGV +D+ PE V RC++E GIGF+ +   H AMK     R+++ ++T+FNILGP+ NPA     V+GVY E LV KMA  L   G KR  VVH  +G+DE++  G     +V+ E +  F+  P ++G  RC++++L+GG    NA ++R VL GE G                + +  T+A G+ LA +   SG AL  ++
Sbjct:  130 SACGSADVLEKLGVNLDVTPEQVERCINEIGIGFLFAPALHGAMKHAIGPRREIGIRTIFNILGPLTNPANADCQVMGVYREELVAKMAGVLHHLGCKRGFVVHGRDGMDEITLTGETAAAEVSPEGVRLFTITPEEFGFSRCSMQALKGGDAVANAAIVRAVLGGEPGPRREIVLLNAGFALLAAGRCATVAAGIDLAAQAIDSGAALMQIE 342          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_EUBR3 (Anthranilate phosphoribosyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=trpD PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.052e-38
Identity = 89/219 (40.64%), Postives = 125/219 (57.08%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  AD LEALGV ID  PE     +++ G+ F  + KYH +MK+V P+RK+L  +TVFNILGP+ NP      ++GVY+E LV  +A  L   G+KR +VV+  + LDE+S      I ++           P D+G  RCT E L+GG P  NA+++R +L G++G               +  K +++ EG+ LA EI  SGKAL TLD  I+VS
Sbjct:  118 SLCGTADCLEALGVNIDQSPEKCVELLNKVGMCFFFAQKYHTSMKYVGPIRKELGFRTVFNILGPLTNPGSPAMQLLGVYDEYLVEPLAQVLVSLGVKRGMVVYGMDKLDEISMSASTKICEIKDGWFRTTVISPEDFGFERCTKEDLKGGTPEENAKIVRDILGGQKGHKRNAVLMNAGASLYIGGKADSMKEGIELAAEIIDSGKALETLDKLIDVS 336          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METLZ (Anthranilate phosphoribosyltransferase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=trpD PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.985e-38
Identity = 83/218 (38.07%), Postives = 124/218 (56.88%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  ADVLEALG+ ID+ PE V   +DE GIGFM +  +HPAMK+   VRK++ +++ FN++GP+ NPA     ++GVY+  L  K+A  L   G KRA+VVH +G DE++  G   + +V   ++  +S DP  +G  +    SL GG   YNA ++R VLSG+ G               +  +  ++A+G+  A +   SG AL  L+  I +S
Sbjct:  117 SKCGSADVLEALGIKIDISPERVCEIIDENGIGFMFAQSHHPAMKYAGKVRKEIGIRSFFNLIGPLSNPAGADAQLLGVYDSPLTEKIAEVLNILGTKRAMVVHGDGYDEITTTGITQVSEVNDGQVRSYSLDPSSFGFQKADAASLFGGDSQYNAHIIRSVLSGDEGPRRDIVILNAAAAIYLGERAGSIADGIKYAEKSIDSGLALEKLENLILLS 334          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ACIBL (Anthranilate phosphoribosyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=trpD PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.985e-38
Identity = 86/217 (39.63%), Postives = 125/217 (57.60%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 650
            S C  ADV+EALGV I+L  E +  C+++ GI F+ +   H AMK+V+P R++LK++TVFN+LGP+ NPA     VVGVY   LV K+A AL + GLKRALVVH  +GLDE++  GP  + +V   K+  +   P  +G+ R  L +L+GG    NA ++R +L GER                 + +  T+   + +A     SG+A   L L +E
Sbjct:  127 SKCGSADVVEALGVNINLPAERMAECLEKVGIAFLFAPAMHTAMKYVQPARRELKMRTVFNLLGPLTNPANASCQVVGVYTGQLVEKLAQALLQLGLKRALVVHGWDGLDEITISGPTKVAEVRDGKVTSYEISPEQFGLQRAPLSALEGGDAQVNAAIIRAILDGERSPKRDVVLLNAAAALVAAGQAETMGAAIPVAAYAIDSGQAKGRLRLLVE 343          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PETMO (Anthranilate phosphoribosyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=trpD PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.205e-38
Identity = 81/217 (37.33%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            ADVLE+LG+ I L P  V RC+ E  I F+ +  +H A K     RK+L ++T+FN+LGP+ NPA + + ++G+Y+  LV  +A  L   G+KRA+VVH SEG+DE S  G   +  + + KIE+    P D G+ + +++ +QGG    N  ++  + +GE G               V+ KVN+L EG+  A+EI  SGKA+  L+  +E +  L
Sbjct:  121 ADVLESLGINISLPPSSVERCLKEINIAFLFAQDFHKATKHAAVPRKELGIRTIFNVLGPLTNPANIKYQLMGIYDPKLVYPIAEVLNNLGVKRAMVVHGSEGIDEFSLSGKNKVAFLNEGKIEKLEISPEDLGLEKYSIQEIQGGSAEENKRIILNIFNGEMGPKRDVVVLNTAAGLYVANKVNSLEEGINFAQEIIDSGKAMKKLEEMVEFTNFL 337          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CLOTH4.708e-3938.53Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_METJA1.370e-3839.15Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_AGRVS1.370e-3840.38Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_GEOUR1.789e-3840.18Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_CARHZ1.789e-3842.79Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_GEOLS3.052e-3839.91Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_EUBR33.052e-3840.64Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_METLZ3.985e-3838.07Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_ACIBL3.985e-3839.63Anthranilate phosphoribosyltransferase OS=Acidobac... [more]
TRPD_PETMO5.205e-3837.33Anthranilate phosphoribosyltransferase OS=Petrotog... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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