CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ROSCS (Anthranilate phosphoribosyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=trpD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.879e-38
Identity = 94/221 (42.53%), Postives = 126/221 (57.01%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDV-TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  ADVLE LGV IDLD  GV RC+++AGIGFM + K+HPAM+FV PVR+++ ++T+FN LGP+ NPA      +GV +  L  KMA AL   G + ALVVH   GLDE++  GP L+++V    K  R+     D G+     E+L GG  + N  ++R +LSG ERG                +     L EG+  AR+   SG AL  L+  I VS
Sbjct:  116 SVCGSADVLEGLGVTIDLDAAGVARCLEQAGIGFMFAQKFHPAMRFVGPVRREIGIRTIFNALGPLSNPAQARHQTLGVADPALAEKMARALYLLGAQHALVVHGHGGLDELTLSGPNLVIEVRAGHKPRRYEVSAGDLGLTPAPREALLGGDVSTNVAIVRAILSGEERGARRDVALLNAAAALVAADYAADLREGLQQARQSLESGAALARLERLITVS 336          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.879e-38
Identity = 84/217 (38.71%), Postives = 120/217 (55.30%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF-GLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            ADVLEALG+ I++ PE +  CV E GIGFM +  YHP++K + P+RK +K  +VFNILGP+LNPA   +A++GV NE ++  M+    +F   KR  + H  GLDE++ LG  +  D+ Q K  R   DP   G   C +E L+GG    NA +L++   G++                V     TL EG+  AR+  + G+AL  L  W   S+ L
Sbjct:  119 ADVLEALGIEIEMSPEELLSCVQEVGIGFMFAPIYHPSLKKLAPIRKGMKFPSVFNILGPLLNPANTEYALIGVSNEPILELMSEVCLKFKNTKRTFLFHGSGLDELTTLGKVVGYDIQQGKKTRLEIDPTSLGFNSCKIEDLKGGNSKLNACILKKAFMGQQSAIADALIFNAGAAMWVFGNAATLEEGIHSARKTLMEGEALRVLAQWAAFSQQL 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.160e-37
Identity = 87/207 (42.03%), Postives = 118/207 (57.00%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTL 635
            AD L+ALGV +D+DP  +   +++AGIGFM +  +H AMK V PVR  L +KT+FN+LGP+ NPA V   ++GV+    V   A AL+  G   A VVH S+G+DE++  GP  + ++    I  F   P D G+PR ++E L+GG P  NA  +RR+L GE G               VS K  TL EG  LA +   SG A  TL
Sbjct:  122 ADALQALGVNLDIDPATIAASIEKAGIGFMFAQAHHAAMKHVAPVRADLGIKTIFNMLGPLSNPALVKRQLLGVFAAEWVKPFAEALRNLGSDSAWVVHGSDGMDELTTTGPSAVAELKGGSIRVFEVTPEDAGLPRASIEDLKGGDPEQNAAAIRRLLDGEAGAYRDIVLLNTAAALIVSGKAATLKEGAGLAAKAIDSGAAKQTL 328          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_MOOTA (Anthranilate phosphoribosyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=trpD PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.514e-37
Identity = 87/220 (39.55%), Postives = 124/220 (56.36%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA---LNTLDLWIE 650
            S C  AD+LEALG+ +DL P+ V RC+DE G+ F+ +  +H AMK+    R+++ ++T FN+LGP+ NPA  P  +VGVY+ +L   +A  L R G +RA VVH S+GLDE++  GP  I  + +  I  ++F P D G+PR  L  L GG    NA + R VLSG RG                +   +TL + +ALA     SG A   L  +  W+E
Sbjct:  116 SRCGSADMLEALGIKVDLPPDAVARCLDEVGMAFLFAPVFHGAMKYAAGPRREIGIRTAFNLLGPLTNPAGAPCQLVGVYDPDLTETVAAVLGRLGSRRAYVVHGSDGLDEVTITGPSKITCLDKGAIRTYTFTPEDVGLPRANLADLAGGTATDNAAIARAVLSGTRGPARDVVLINAAFALLAAGAADTLQQALALAESSIDSGAAAAKLQAMVAWVE 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_MESSB (Anthranilate phosphoribosyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.514e-37
Identity = 85/213 (39.91%), Postives = 123/213 (57.75%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            AD L ALGV I+L P+ +  C+ EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A+ L++ G ++A VVH +GLDEM+  G   +  +   ++  F   P + G+ R    +L+GG   YN + LRRVL GER                V+ K  TL + VALA E   SG+AL  L+  +EVS
Sbjct:  122 ADSLVALGVNIELGPDQIAACIAEAGVGFMFAPSHHAAMRHVGPTRVELGTRTIFNLLGPLSNPAGVKRQLVGVFSAQWVEPLAHVLRQLGTEKAWVVHGDGLDEMTTAGVTRVASLEYGEVRTFEITPEEVGLQRSAAAALKGGDGEYNGKALRRVLEGERNAYRDIAVLNAGGALIVAGKAETLKDAVALASESIESGRALAALEKLVEVS 334          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.583e-37
Identity = 89/217 (41.01%), Postives = 127/217 (58.53%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            ADVL ALGV IDLDP G+ RC+ EAGIGFM +  +HPAMK V P R ++  +T+FN+LGP+ NPA V   +VGV+ ++ ++ +A  L+  G ++A VVH S+GLDE++  G   I  + + +I  F+  P D G+ R   E L+GG   +NA+ LR VL G  G               V+ +   L EGV +AR    +G A   L+  + VS+ L
Sbjct:  122 ADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGPTRVEMGTRTIFNLLGPLSNPAGVTRQMVGVFAKSWIVPLAEVLRTLGSQKAFVVHGSDGLDEITISGGTDIAVLDEGRIHTFTIMPEDVGLKRHPAEDLKGGDAVHNAKALRTVLDGAEGAYRDVSLFNAAAALVVAGRAKDLKEGVEMARVSLDTGSARARLEHLVAVSEKL 338          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.583e-37
Identity = 93/222 (41.89%), Postives = 127/222 (57.21%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDV-TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSC-KVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            S C  ADVLE LGV I+LD   V RC+D+AGIGFM + K+HPAM+FV PVR+++ ++TVFNILGP+ NPA     V+GV +  L  KMA AL   G + ALV+H   GLDE++  GP L++DV       R+     D G+     E+L+GG  + N  ++R +LSGE                 V+  +   L +G+  AR    SG AL  L+  I VS+
Sbjct:  116 SVCGSADVLEGLGVNIELDAASVARCLDQAGIGFMFAQKFHPAMRFVGPVRREIGIRTVFNILGPLSNPAHARHQVLGVADPALAEKMARALHLLGTQHALVIHGHGGLDELTLSGPNLVIDVRAGHTPRRYEVTAADLGLAPAPREALRGGDVSVNVAIVRGILSGEDQSARRDVALLNAAAALVAADRAADLRDGLHQARHSLESGAALARLERLITVSR 337          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METS3 (Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.374e-37
Identity = 85/217 (39.17%), Postives = 129/217 (59.45%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 650
            S C  ADVLEALGV I ++PE   + + E  + F+ +  YH AMKFV  VRK+L ++T+FNILGP+ NPA     V+GVY+E+LV  +   L+  G+K AL V+  +GLDE+S      + ++   +++ +   P D+G+ RC+ E L GG P  NAE+   +L+G++G               V+ K +++ +GV LA EI  SG+A   L+ +IE
Sbjct:  115 SKCGAADVLEALGVNIYIEPEKSLKILKEINLCFLFAQNYHLAMKFVAGVRKELSIRTIFNILGPLTNPAGATMQVLGVYDESLVKPLCEVLKNVGVKSALSVYGQDGLDEISVSDKTSVCELRDGRLKCYEIAPEDFGMERCSKEDLVGGNPRENAEITLSILNGQKGPKRNAVVLNSAAALYVAGKADSIEDGVRLASEIIDSGRAKKQLEKFIE 331          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_DESRM (Anthranilate phosphoribosyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.374e-37
Identity = 85/223 (38.12%), Postives = 122/223 (54.71%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 668
            S C  ADVLE LGV + L PE    C+D+ GI F+ +   H AMK+    RK++ ++TVFNILGP+ NPA     V+GVY+ +L   +A  L   G KR+ V+H   GLDE+S  G  L+ +V   +++    DP+DYG+ R  + +L GG    NA +++ +LSG  G                   V  LA G+ LA +I   G AL  L+L +E S+ L+
Sbjct:  116 SKCGSADVLEQLGVFVQLTPEEAGLCLDQVGIAFLFAPLLHGAMKYAAAPRKEIGIRTVFNILGPLTNPAFAENQVLGVYSSDLAPVLAQVLANLGTKRSFVIHGCGGLDEISLAGEALVYEVKDNQVKEMIIDPMDYGLDRAPISALAGGDAKRNARMIKNILSGAPGPQRDTIIINAALGLIAGGLVRDLAMGIRLAEQIIDEGYALKKLNLLVEFSQTLV 338          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_THERP (Anthranilate phosphoribosyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.406e-37
Identity = 88/211 (41.71%), Postives = 127/211 (60.19%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQE---KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            ADVLEALGV IDL+P  V RCV+EAGIGFM + ++HPA++   PVR++L  +TVFN+LGP+ NPA V + ++GV    LV  +A  L    ++ ALVVHS +GLDE+S   P  + +V +    ++ R++ +P   G+ R   ++L+GG    NA ++R VL G RG                +    +LAEG+ LAR    SG AL+ L+
Sbjct:  122 ADVLEALGVRIDLNPSAVARCVEEAGIGFMFAQRFHPALRHAAPVRRELGFRTVFNVLGPLANPARVRYQLLGVAMPELVETVARVLALLDVEHALVVHSADGLDEISLGAPTTVYEVRRNGTVEVRRWTLEPESLGLERVPSDALRGGTAEENARIVRAVLEGARGPARDVVLLNAAAALVAADAAQSLAEGLELARHAIDSGAALDRLE 332          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ROSCS8.879e-3842.53Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_CHLCV8.879e-3838.71Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_PARL11.160e-3742.03Anthranilate phosphoribosyltransferase OS=Parvibac... [more]
TRPD_MOOTA1.514e-3739.55Anthranilate phosphoribosyltransferase OS=Moorella... [more]
TRPD_MESSB1.514e-3739.91Anthranilate phosphoribosyltransferase OS=Mesorhiz... [more]
TRPD_XANP22.583e-3741.01Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_ROSS12.583e-3741.89Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_METS33.374e-3739.17Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_DESRM3.374e-3738.12Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_THERP4.406e-3741.71Anthranilate phosphoribosyltransferase OS=Thermomi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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