CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.730e-36
Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLLV 671
            S C  ADVLE LGV IDL P+ V  CV++  +GFM + K+H AMK+    R++L V+T+FNILGP+ NPA V   V+GV++E+L   MA  L+  G++R +VVH  +GLDE++      + ++    I  +  DP  + IP    E L GG    NA ++  ++ GE G               V    N+L EG+  A E+   G AL+ L+  I++S+ L V
Sbjct:  116 SQCGSADVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKYAAAARRELGVRTIFNILGPLTNPAKVKGQVLGVFDESLTEVMAQVLKELGVERGMVVHGLDGLDEITTTTKTKVSELKNGMISNYVIDPRQFDIPLTDKEDLAGGDAEKNASIILNIVKGETGGKRNMVLINAGAAIYVGNAANSLQEGIDRAAEVIDMGLALDKLNQLIKLSQELKV 339          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SYNWW (Anthranilate phosphoribosyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=trpD PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.872e-36
Identity = 82/215 (38.14%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            ADVLEALGV + L+P+  R+ +D+AGI F+ +  YHP +K V  +R+ L + T+FN +GP+LNP    + V+G+ + NL   +A  LQR G KRALVVH+  G+DE+SP G   + DV +  +E F  DP + GI   +L+++QGG    +A ++ +VL GE G                + +   + EG+ +A E   +GK++ TL   I  S+
Sbjct:  120 ADVLEALGVEVQLEPDEARQLLDKAGITFLFAPHYHPILKQVGGLRRGLGIATIFNFMGPLLNPCRPSYQVLGISDSNLQEAVAGTLQRLGRKRALVVHAFNGMDEISPEGKTRVFDVGEHGLEVFDIDPEELGIGGFSLDAIQGGDATASARLVIKVLQGEPGPYRDTVILNTAAALLTAGRAKNIQEGMQMAAEAIDAGKSMETLQKMISFSR 334          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.363e-36
Identity = 84/217 (38.71%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            ADVLEALG+ +DL PE V RC+DE GIGF+ +   H +MK V PVR+++ ++ +FN+LGP+ NPA     ++GVY+ NL   +A  L   G+K ALVVH ++G+DE+S   P ++ ++    +  +   P D G+ R   E ++GG    NA +   VLSGE G                + +V TL EGV LA +   SG+A   L+   E +  L
Sbjct:  120 ADVLEALGIHLDLTPEEVGRCIDEVGIGFLYAPALHTSMKHVAPVRREIGLRNIFNLLGPLTNPAMAQAQLMGVYDPNLTEPLARVLGNLGVKHALVVHGTDGVDEISISAPTVVSEMRDGFVHTYRVVPEDVGLSRAPREYIRGGTKEENARITESVLSGEPGPRRDVVLLNAAAALLAADRVRTLREGVELAAQSIDSGEARRVLERMREFTHRL 336          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_THETH (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 88/211 (41.71%), Postives = 127/211 (60.19%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 647
            AD+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  119 ADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_THET8 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpD PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 88/211 (41.71%), Postives = 127/211 (60.19%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 647
            AD+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  119 ADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_THET2 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpD PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 88/211 (41.71%), Postives = 127/211 (60.19%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 647
            AD+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  119 ADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_HYPNA (Anthranilate phosphoribosyltransferase OS=Hyphomonas neptunium (strain ATCC 15444) GN=trpD PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 83/215 (38.60%), Postives = 119/215 (55.35%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            ADVLEALG+ ++L     + C++ AG+GF+ +  YH AM+ V P+R KL ++T+FN+LGP+ NPA   ++V+GVY++  V  MA AL+  G + A VVH   G+DE+S  GP  + +VT   I  F   P D G+P   L +L+GG P  N   +R +L G  G               VS  V  L  GV  A +   SG A  TL+  +  S+
Sbjct:  124 ADVLEALGLQLELSDTAFKSCLEIAGVGFLFARSYHSAMRHVAPIRHKLGIRTIFNLLGPLSNPAGAEYSVLGVYDKQWVTPMAEALKALGTRCAWVVHGLAGIDEISISGPTDVCEVTPASIRHFQITPSDAGLPSHPLSTLEGGAPEENTAAIRDLLDGREGPFRDIVLINAAAGLHVSGMVADLPAGVQRAAQAIDSGAARETLNTLVRTSR 338          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CLOPH (Anthranilate phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=trpD PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 87/219 (39.73%), Postives = 125/219 (57.08%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  ADVLEALGV I L P    + ++E G+ FM +  YH AMKFV PVR++L ++T+FNILGP+ NPA     ++GVY E LV  +A  L + G+KR +VV+  +GLDE+S     +   +   K+  +  +P   G+ +C  E L GG PA NA + R +L+GE+G               +     TL E   +A +I  S KA++ LD +IE+S
Sbjct:  115 SKCGAADVLEALGVNIMLAPLESAKILEEMGLCFMFAQTYHSAMKFVAPVRRELGIRTIFNILGPLANPAGANLELLGVYEEALVKPLARVLLKLGVKRGMVVYGRDGLDEISLSHQTVCCKIRDGKLYDYILEPEQIGLTKCKKEDLVGGSPAENAAITRAILNGEKGPKRDAVIFNAAACIYMVRDDITLQEAAKIATDIIDSKKAIHQLDKFIELS 333          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_UNCTG (Anthranilate phosphoribosyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=trpD PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.085e-35
Identity = 83/219 (37.90%), Postives = 129/219 (58.90%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  AD+LE LGV I L P+     + + G+ F+M+  +H +MK+V  VRK+L ++T+FNILGP+ NPA   + ++GVY+ENLV  +A+ L   G+KRA+VVH  +GLDE++      I +V + ++  F   P  +G+ RC+L  L GG P  N E+   +L+GE+G               +     TL + + +A+++  S KALN LD +I+ S
Sbjct:  115 SKCGSADLLEVLGVNIMLTPQQCEAILKKVGMCFLMAQTFHSSMKYVAKVRKELGIRTIFNILGPLANPAKASYELIGVYDENLVEPIASVLVNLGVKRAMVVHGHDGLDEITLSDTTTICEVNRGRLNSFFITPEQFGLKRCSLSELIGGTPQENREIALNILNGEQGAKRDTVVLNSAVCLYMFYDNMTLKQCLRMAQDMIDSKKALNKLDEFIKAS 333          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPT (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.085e-35
Identity = 90/214 (42.06%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL ALGV ID+ PE V RCV+EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  L+  G +   VVH S+GLDE++  G   + ++   +I  F   P D G+PR   ++L+GG    NA  LR VL G  G               V+ K   L EGVAL  +   SG A   L   I VS
Sbjct:  122 ADVLAALGVKIDITPEQVGRCVNEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGSEAVWVVHGSDGLDEITLSGTTAVAELKNGEITSFEISPEDAGLPRAPADALKGGDAQANAVALRAVLEGMPGPYRDVALLNAAATLVVAGKARDLKEGVALGTQSIDSGAAEARLKKLIAVS 335          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ALKMQ3.730e-3637.95Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPD_SYNWW4.872e-3638.14Anthranilate phosphoribosyltransferase OS=Syntroph... [more]
TRPD_SYMTH6.363e-3638.71Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_THETH8.310e-3641.71Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET88.310e-3641.71Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET28.310e-3641.71Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_HYPNA8.310e-3638.60Anthranilate phosphoribosyltransferase OS=Hyphomon... [more]
TRPD_CLOPH8.310e-3639.73Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_UNCTG1.085e-3537.90Anthranilate phosphoribosyltransferase OS=Uncultur... [more]
TRPD_RHOPT1.085e-3542.06Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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