CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_BUCSC (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Schlechtendalia chinensis GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22
Identity = 52/160 (32.50%), Postives = 94/160 (58.75%), Query Frame = 3
Query:   21 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 500
            D+L+   + +    E  +  +++  I F+ + KYH   K++  VRK LK++T+FNILGP++NP+  P ++VGVY+  L++ MAN L++     A+VVHS+  DE++      + ++    I  ++  P D+G+      ++ GG P  N E+++ VL G+
Sbjct:  121 DLLKEFNIDLHASCEKSQNMLNKLNICFLFAPKYHANFKYISLVRKTLKIRTLFNILGPLINPSKPPLSLVGVYSTKLMVPMANVLKKLNSYHAIVVHSDHTDEVTLHDSTNVTELKNNNIISYTLCPDDFGVKYYNKNAILGGTPKENYEIIKYVLKGK 280          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SULIA (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.347e-22
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 443
            ADVLEALG  I + PE  +  V +    F+ S  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++GV++++ +  ++ +       + ++VH E G+DE+SP+G   +  V++  IE   FD  D+GI    ++ L
Sbjct:  119 ADVLEALGYNIIVPPERAKELVHKTNFVFLFSQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKVILVHGEPGIDEVSPIGKTFMKIVSKRGIEEVKFDVTDFGISSIPIDKL 261          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            S+   +DVL ALG+ + L PE V   +   GI F  ++ +HP       VR +L V TVFNILGP+ NPA    + VGV   + V  +    Q  G    +    +GLDE+S  G   + +V++  +     DP D G+P   +E L G   A+NA V+R VL+G+ G
Sbjct:  120 SSSGSSDVLAALGIDLTLPPERVAEVLRATGITFAFASAFHPGFANAAAVRSQLGVPTVFNILGPLCNPARPEASAVGVAPLDRVPLIVGVFQTRGATALVFRGDDGLDELSTTGHSHVWEVSRGLVTEHDIDPRDLGLPTAQIEDLLGKDAAHNAAVVRAVLAGQEG 287          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_DICTD (Anthranilate phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 63/209 (30.14%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   21 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH--SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            DV+EALG     +PE + + +D+ GIG + +  +HP +     VR++L + T+FN+ GPMLNPA +   ++GVY+E ++ +MA A         L  H   +G+DE+S  G  +   +   KI+ F F P D G+ R   E   GG    NA++L  +  G  +                V  KV  + EG  + ++  + GK    ++
Sbjct:  121 DVIEALGFKCSDNPEEIAKDIDDKGIGIIFAPYFHPVVGKAVKVRRELGIGTIFNMAGPMLNPANLSGQILGVYSEKVMHRMAEASLILKKDNILFYHGKDDGIDEISLSGKTVFAYLKNSKIDYFEFSPEDIGVKRYQREDFNGGDAQENAKILENIFKGRAKEAHIDIVAVNSAFALWVLGKVKEVKEGFDMVKDHIMKGKVYEYIE 329          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SULIM (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 54/143 (37.76%), Postives = 86/143 (60.14%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 443
            ADVLEALG  I + PE  +  V +    F+ +  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++GV++++ +  ++ +       + ++VH E G+DE+SP+G   +  V++  IE   FD  D+GI    ++ L
Sbjct:  119 ADVLEALGYNIIVPPERAKELVHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKVILVHGEPGIDEVSPIGKTFMKIVSKRGIEEVKFDVTDFGISSIPIDKL 261          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SULIK (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 54/143 (37.76%), Postives = 86/143 (60.14%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 443
            ADVLEALG  I + PE  +  V +    F+ +  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++GV++++ +  ++ +       + ++VH E G+DE+SP+G   +  V++  IE   FD  D+GI    ++ L
Sbjct:  119 ADVLEALGYNIIVPPERAKELVHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKVILVHGEPGIDEVSPIGKTFMKIVSKRGIEEVKFDVTDFGISSIPIDKL 261          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METS5 (Anthranilate phosphoribosyltransferase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFD 401
            AD LE+LG  I + PE  +  +      F+ +  YHP+MK V PVRK L V+T+FN+LGP+ NPA     V+GVY+   + K+A A  + G  + ++VH E GLDE+SP G   I +VT  K+E +++D
Sbjct:  119 ADFLESLGYNIQVPPEKAKDLLSRNNFVFLFAQLYHPSMKNVAPVRKVLGVRTIFNLLGPLTNPAGSERQVMGVYSLPFMRKLAEAALKLGYVKLVLVHGEPGLDEVSPQGKTYITEVTGSKVEEYTYD 247          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_GEOTN (Anthranilate phosphoribosyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 66/208 (31.73%), Postives = 103/208 (49.52%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRAL-VVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSC-KVNTLAEGVALAREIQLSGKALNTL 635
            ADVLE LG+ I   P+  +  ++  G+ F+ +  YH AMK     RK++  +TVFN++GP+ NPA     VVGVY+     K+A  ++R G +  L V   +GLDE S      ++++    I RF   P + G+PR  L  +Q   P  +A +L  V++                    +  K  T+A+GV +A++  LS  A   L
Sbjct:  120 ADVLERLGINIQSSPDAAKEALETNGLTFLYAPLYHTAMKHAAGPRKEIGFRTVFNLIGPLANPARCKRQVVGVYSTRYAEKLAETMRRLGSEHVLFVTGRDGLDECSIATETDVVELKDGAIRRFVITPEEVGLPRGELADVQVHNPEESAALLEAVMTVTAPESAVNIVALNAGVALYAAGKTKTIADGVTMAKDAILSNAAYRQL 327          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_FRAAA (Anthranilate phosphoribosyltransferase OS=Frankia alni (strain ACN14a) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 68/182 (37.36%), Postives = 89/182 (48.90%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDV--------------TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 506
            SAC  AD+L  LGV IDL P GV  C+  AGI F  +  +HPAM+ V   R ++ V T FNILGP+ NPA      VGV +  L   +A  L   G +  +    +GLDE++P     I  +              T     R  FDP D GI    +  L+G    +NA V R +L+GE G
Sbjct:  121 SACGSADLLAELGVAIDLPPAGVEACLRAAGIAFCFARIFHPAMRHVGGPRAEIGVPTAFNILGPLTNPAEPGAQAVGVADARLAPVVAQVLADRGTRALVFRGDDGLDELTPTTTSTIWVIPGGQPSAAGEAAGQTAAPPRREQFDPRDVGIHVPDIAVLRGADAPHNAAVTRALLAGEPG 302          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_SYNS9 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain CC9902) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22
Identity = 65/163 (39.88%), Postives = 91/163 (55.83%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEK-IERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 500
            ADVLE LG+ +      V   +   G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV   +L+  MA AL + GL RA+VVH + GLDE S  G   +  V   K I      P D G+    LE+L+GG  A N  +L  VL GE
Sbjct:  130 ADVLEGLGLNLKAPLASVVEAISTTGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLQPQAQVLGVARADLLDPMAGALDQLGLDRAVVVHGAGGLDEASLAGANELRMVEAGKPIATRFVSPDDLGLAAAPLEALRGGDLADNQRILENVLKGE 292          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BUCSC1.797e-2232.50Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_SULIA2.347e-2238.46Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_LEIXX3.066e-2236.31Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_DICTD3.066e-2230.14Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_SULIM5.229e-2237.76Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIK5.229e-2237.76Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_METS55.229e-2242.64Anthranilate phosphoribosyltransferase OS=Metallos... [more]
TRPD_GEOTN5.229e-2231.73Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_FRAAA5.229e-2237.36Anthranilate phosphoribosyltransferase OS=Frankia ... [more]
TRPD_SYNS96.830e-2239.88Anthranilate phosphoribosyltransferase OS=Synechoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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