CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPA (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris GN=trpD PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.085e-35
Identity = 90/214 (42.06%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL ALGV ID+ PE V RCV+EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  L+  G +   VVH S+GLDE++  G   + ++   +I  F   P D G+PR   ++L+GG    NA  LR VL G  G               V+ K   L EGVAL  +   SG A   L   I VS
Sbjct:  122 ADVLAALGVKIDITPEQVGRCVNEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGSEAVWVVHGSDGLDEITLSGTTAVAELKNGEITSFEISPEDAGLPRAPADALKGGDAQANAVALRAVLEGMPGPYRDVALLNAAATLVVAGKARDLKEGVALGTQSIDSGAAEARLKKLIAVS 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PELCD (Anthranilate phosphoribosyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=trpD PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.085e-35
Identity = 81/220 (36.82%), Postives = 126/220 (57.27%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            S C  ADVLEALGV +D+  + V RC+ E GIGF+ +   H AM++    R+++ ++T+FNILGP+ NPA     V+GVY E+LV  +A+ L R G +R  VVH  +G+DE++   P  I D+ + +    +  P DYG+ RC LE L GG   +NAE++R +L+GE G                + K +++ +G+  A +      AL  L+  I +++
Sbjct:  132 SMCGSADVLEALGVHLDIGVDTVERCIAEEGIGFLFAPALHGAMRYAIGPRREIGIRTIFNILGPLTNPAGADRQVLGVYREDLVATLADVLCRLGCRRGFVVHGMDGMDEVTLTAPTRIADIREGRYSLSTIAPEDYGLQRCRLEDLAGGDARHNAELVRGILAGEAGPRRDIVLLNSAFALVAAGKADSIEDGMRAAAQAIDEHAALAKLNALIRMTQ 351          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_DESHY (Anthranilate phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 83/211 (39.34%), Postives = 124/211 (58.77%), Query Frame = 3
Query:    9 CRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALV-VHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            C  ADVLE LG+ +   PE   R +   G+ F+ +  YHPAM  V   R++L ++T+FN+LGP+LNPA  P+ ++GV + +L+ KMA ALQ  G KRA+V V  +GLDE++  G    + +   +I+ F   P +YG+  C+L+ LQGG PA N ++  R+L G++G                + K   + EG+ALA E   SGKAL+ L+
Sbjct:  120 CGSADVLEQLGISLKATPESSERHLQHIGMTFLFAQVYHPAMAKVAAERRELGIRTIFNLLGPLLNPAGAPYQLLGVSSPSLLPKMAKALQILGSKRAVVAVGEDGLDEVTLTGATQAILIDGGEIQPFIIRPEEYGLNLCSLQDLQGGTPAENGQITLRILQGKKGPQRDIVLLNAGTALYAANKAAGIREGIALAAESLDSGKALSILE 330          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_NITHX (Anthranilate phosphoribosyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 90/214 (42.06%), Postives = 116/214 (54.21%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            AD L ALG+ IDL PE V RCV+EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G     VVH S+GLDE++  GP  +  +    I  F   P D G+ R   ++L+GG    NA  LR VL G  G               V+ K  TL +GVA       SG A+N L   I VS
Sbjct:  122 ADCLAALGIKIDLTPEQVGRCVNEAGIGFMFAPSHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVTRQMVGVFSRQWVQPLAQVLKNLGSDSVWVVHGSDGLDEITLAGPTFVAALENGNIRSFEVTPEDAGLSRAHGDALKGGDAEANAASLRGVLEGRPGAFRDVALLNAAAALIVAGKAKTLKDGVAFGTTSLDSGAAMNKLKQLIAVS 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD2_RALSO (Anthranilate phosphoribosyltransferase 2 OS=Ralstonia solanacearum GN=trpD2 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 86/215 (40.00%), Postives = 122/215 (56.74%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            ADVL ALGV +D  P  + RC+ EAGIGFM +  +HPA+K + PVR  L  +T+FN+LGP+LNPA V   ++GVY+   V  +A+AL   G +RALVVH S+GLDE++ +GP  +  + + ++  F   P   G+ R     L+G    +NA  LRRVL G+ G                +  V    + +ALAR     G AL TL+  +E S+
Sbjct:  122 ADVLSALGVNLDQTPADIERCIAEAGIGFMFAPTHHPALKQLMPVRVDLATRTIFNLLGPLLNPAGVRHHLIGVYSRAWVEPLAHALGDLGSERALVVHGSDGLDEITTVGPTFVSMLARGRVRSFEITPEMVGLVRANPAELKGADGKWNAVALRRVLEGQPGAYRDIALFNAAGGLIAAGVVENWPDAMALARASVDGGAALATLNRLVEASQ 336          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PHEZH (Anthranilate phosphoribosyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.418e-35
Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL  LGV I   PE   + +DEAGI F+ +  +H AM+ V P+R +L  +T+FN+LGP+ NPA     VVGV+ E  V  +A AL   G ++A VVH  GLDE++  G   + + +  K+  F+  P   G+ R  L  + GG PA NA+ LRR+L+GE G               V+ KV TL EGV LA  +   G+A   L+  +E++
Sbjct:  123 ADVLGELGVNIAAPPEKQLQALDEAGICFLFAPAHHSAMRHVSPIRAELGFRTIFNLLGPLTNPAGAQRQVVGVFAERWVKPLAQALGMLGSEKAWVVHGAGLDELTTTGETSVAEFSDGKVRLFTITPEAVGLRRAALADITGGSPAENAQALRRLLAGETGAYRDIVALNAAAAFLVADKVETLREGVELAGRVLDEGRAQAALERLVEIT 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.158e-35
Identity = 89/214 (41.59%), Postives = 117/214 (54.67%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL ALGV ID+ P  V RC+ EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +   KI  F   P D G+PR   + L+GG    NA  L+ VL G+                 V  + NTL +GVA   +   SG A   L   I VS
Sbjct:  122 ADVLAALGVKIDITPAEVGRCIKEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVTRQMVGVFSRQWVQPLAQVLKNLGSESAWVVHGSDGLDEITISGPTFVAALADGKITTFEITPEDAGLPRAGADVLKGGDAEANAVALQGVLDGKPSAYRDVALLNAAAALIVGGRANTLKDGVAQGAQALDSGAAAAKLKQLIAVS 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_DESHD (Anthranilate phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=trpD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.158e-35
Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 3
Query:    9 CRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALV-VHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            C  ADVLE LG+ +   PE   R +   G+ F+ +  YHPAM  V   R++L ++T+FN+LGP+LNPA  P+ ++GV + +L+ KMA ALQ  G KRA+V V  +GLDE++  G    + +    I+ F   P +YG+  C+L+ LQGG PA N ++  R+L G++G                + K   + EG+ALA E   SGKAL+ L+
Sbjct:  120 CGSADVLEQLGISLKATPESSERHLQHIGMTFLFAQVYHPAMAKVARERRELGIRTIFNLLGPLLNPAGAPYQLLGVSSPSLLPKMAKALQILGSKRAVVAVGEDGLDEVTLTGATQAILIDGGAIQPFIIRPEEYGLNLCSLQDLQGGTPAENGQITLRILQGKKGPQRDIVLLNAGTALYAANKAAGIREGIALAAESLDSGKALSILE 330          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CHRVO (Anthranilate phosphoribosyltransferase OS=Chromobacterium violaceum GN=trpD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.158e-35
Identity = 81/222 (36.49%), Postives = 126/222 (56.76%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            S+   ADVLE LGV + L PE V +C+DE G+GFM +  +H AMK V P+RK+L  +T+FNILGP+ NPA     ++GV++ +LV   +  L+  G +  ++VH  +GLDE++  GP ++ ++   +I  +  +P ++G P C L+ L+    A + + L  VL G+ G                +    +LA+GV +ARE   SGKA   L   I +S+ L
Sbjct:  119 SSSGSADVLELLGVNLQLTPEQVGQCLDEIGLGFMFAPNHHSAMKHVAPIRKELGARTIFNILGPLTNPAAADHQLMGVFHPDLVGIQSRVLKMLGSRHVMIVHGCDGLDELTLSGPSMVAELKNGEILEYELEPGEFGFPLCELKDLRADTAAQSRDRLLAVLDGQPGPARDIVLLNAGAAIYTADIAPSLADGVTMAREALDSGKAKQKLQQLIALSRKL 340          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_THETN (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis GN=trpD PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.124e-35
Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 623
            ADVL  LG  I+ +P   ++ ++E G+GF+ +  YH AMK V P+R++L  +TVFN+LGP+ NPA +   V+GVY+ NL   +A  L + G++RA+VVH  +GLDE++   P  + +V + +I  +  DPLD+ IP    E L+G GP  NAE++  +L G++G               V   V  L EGV LA  +  SG A
Sbjct:  121 ADVLRELGFNIEAEPMYTKKMIEEKGMGFLFAPLYHRAMKNVLPIRRELGTRTVFNLLGPLTNPAPIKGQVLGVYDRNLTHPIAEVLLKLGIERAMVVHGFDGLDEITTTAPTYVSEVKEGEIFDYVIDPLDFDIPYSKPEDLKGKGPRENAEIIIDILKGQKGPRRDIVVLNTAAALYVGKLVENLKEGVELAERLLNSGLA 323          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHOPA1.085e-3542.06Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_PELCD1.085e-3536.82Anthranilate phosphoribosyltransferase OS=Pelobact... [more]
TRPD_DESHY1.418e-3539.34Anthranilate phosphoribosyltransferase OS=Desulfit... [more]
TRPD_NITHX1.851e-3542.06Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD2_RALSO1.851e-3540.00Anthranilate phosphoribosyltransferase 2 OS=Ralsto... [more]
TRPD_PHEZH2.418e-3539.44Anthranilate phosphoribosyltransferase OS=Phenylob... [more]
TRPD_RHOPB3.158e-3541.59Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_DESHD3.158e-3539.34Anthranilate phosphoribosyltransferase OS=Desulfit... [more]
TRPD_CHRVO3.158e-3536.49Anthranilate phosphoribosyltransferase OS=Chromoba... [more]
TRPD_THETN4.124e-3539.41Anthranilate phosphoribosyltransferase OS=Thermoan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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