CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_COLP3 (Anthranilate phosphoribosyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=trpD PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.124e-35
Identity = 77/214 (35.98%), Postives = 123/214 (57.48%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            AD+LEA GV + + PE    C+ +  + F+ +  YH   K+  PVRK + ++T+FNILGP++NPA     ++GVY   L++ MA ALQ  G+KRA VVH  GLDE++  G    +++   ++   +  P D+G+   TLE ++GG PA NA+++R +LSG+ +                +  K  +L +   LA E+  SGK L+TL   +++S
Sbjct:  137 ADLLEAFGVNLSMSPETANHCLAQTNLCFLYAPAYHSGFKYAGPVRKAMGIRTLFNILGPLVNPAKPNIMLLGVYTPELLMPMAQALQLTGVKRAFVVHGSGLDEIALHGNTQAIEINNGELIERTISPQDFGLKNYTLEEIKGGTPAENADIIRDILSGQGKDAHNAAVIVNCAALLYLHDKAESLTQAAQLATEVLASGKGLSTLLTLVKLS 350          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 626
            +DVLEALG+ +DL PE VR+ +++ GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     VVGV+++NL   +A AL   G + ALVVH +G+DE++  G   + ++   K+  ++  P   G+ R +    +GG P  NA  L  +  G++G               VS  V ++ + + +A +   SGK +
Sbjct:  123 SDVLEALGIKVDLSPEYVRKTIEKIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGAKGQVVGVFDKNLCEPIAYALAELGTEHALVVHGDGMDEITNTGETYVAELKNGKVSTYTLTPESLGMLRASPGDTKGGSPKENARDLLCIFKGQKGPKRDLIILNAAAALYVSGIVGSIRQAIPIAEDAIDSGKVM 325          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METKA (Anthranilate phosphoribosyltransferase OS=Methanopyrus kandleri GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 88/225 (39.11%), Postives = 132/225 (58.67%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPA--CVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQ-EKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE---RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  AD+LEALGV I+ DP+ V+RC++E G GFM + K+HPAMK V PVR+KL ++TVFN+LGP+ NPA   V   V+GVY+ENL+  +A AL   G++R LVV+  +G+DE+S      ++ V   E  +R +  P D G+ R   + + G  P  +AE  R++L GE                    V   V++L +G+  A ++   G+AL  L+  +++S
Sbjct:  114 SECGSADILEALGVNIEADPDTVKRCIEEVGFGFMFAPKFHPAMKNVMPVRRKLGIRTVFNVLGPLTNPARERVTGQVIGVYSENLLDLVAGALAELGVRRGLVVYGLDGVDELSVTCENEVVYVDDGEVTDRDTVAPEDVGLDRADPKDVAGADPETSAEEARKILGGELPVDHPKVQMTAFNAGAALYVGEAVDSLEKGIQRALDVLEEGRALEVLEKVVDLS 338          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_LARHH (Anthranilate phosphoribosyltransferase OS=Laribacter hongkongensis (strain HLHK9) GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 84/222 (37.84%), Postives = 124/222 (55.86%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            S+   ADVLEALGV + L  E V RC+DE G+GFM +  +H AMK+V PVR++L V+T+FNILGP+ NPA     ++GV++ +LV   A  L + G + A+VVH  +GLDE+S  GP L+ ++    I  +  DP ++G   C+   L       +   L  VL  + G               V+   ++LAEG+ LA+E+  SG A   L   +E++  L
Sbjct:  119 SSSGSADVLEALGVKLALSAENVGRCIDEIGLGFMFAPNHHTAMKYVAPVRRELGVRTIFNILGPLTNPAGAENQLMGVFHPDLVGIQARVLSQLGARHAMVVHGRDGLDEISLSGPTLVAELKNGWIREYELDPAEFGFSLCSAADLAAPTAEDSKARLLAVLDNQPGPARDIVCLNAGAAIYVAGVTDSLAEGIRLAQELLTSGAARQKLGQLVELTHKL 340          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_EUBE2 (Anthranilate phosphoribosyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 81/217 (37.33%), Postives = 120/217 (55.30%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 650
            S C  AD LEALGV ID  P  + + + +  I F+ + KYHPAM+FV  VRK++ ++T+FNILGP+ NPA     + GVY+E LV  +A+ L   G KRA+ ++  + +DE+S      + +   ++ + ++  P D+G  RC  E L GG PA NA + R +L G  G               ++    T+ EG+  AREI  SG A   L+ +IE
Sbjct:  115 SKCGTADCLEALGVKIDAAPARMAQILKDINICFLFAQKYHPAMRFVGGVRKEIGIRTLFNILGPLANPAGASMQLFGVYSEELVEPLAHVLHNLGCKRAMTIYGMDSIDEISLSADTKVCEFKGDEFKSYTIKPEDFGFTRCKKEDLAGGEPAVNARIARDILEGAEGPKTDVVLLNAGAAIYLASDGITMKEGIEKAREIIKSGAAKKQLERFIE 331          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_CLOCE (Anthranilate phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 85/219 (38.81%), Postives = 121/219 (55.25%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            S C  AD+LEALG+ I L  E     + + G+ FM +  YH +MK+  PVRK+L V+T+FNILGP+ NPA     ++GVY+ENLV  +A  L   G+KRA+VVH  +GLDE++      I +V+   I  F   P   G  RC L+ L GG P  NA +   +L+G +G               +S    TL + V +A ++  SG A   L+ +IE+S
Sbjct:  115 SKCGSADLLEALGINIALSAEQSAEILQKIGMCFMFAPTYHASMKYAAPVRKELSVRTIFNILGPLANPAGANMQLLGVYDENLVEPLARVLLNLGVKRAMVVHGHDGLDEVTLCNTTTICEVSNGNINSFFLSPEQLGFSRCLLKELVGGDPKKNASIALDILNGSKGPKRDIVVLNSALCLYMSYNQITLRDCVKMAEQLIDSGAAKAQLNKFIELS 333          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_AQUAE (Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 81/217 (37.33%), Postives = 127/217 (58.53%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 665
            AD LEALG  ++L PE V R ++E G GFM +  +HPAMK V   R+++ V+++FN++GP+ NPA V   ++GV+++  V K A AL+  G+K+A VVH E G+DE+S  G   + +V++E I  F+F P + G+ R +L  ++   P  + +V   VL GE G               VS +   + E   +A+E   SGKAL  L+ ++E+S  +
Sbjct:  124 ADFLEALGAKVELLPEKVARLIEEVGFGFMFAPLFHPAMKRVVSPRREVGVRSIFNLIGPLTNPAGVKRYLLGVFSKEYVDKFAKALKNLGVKKAFVVHGEGGIDEVSVEGETYVTEVSEEGIRSFTFSPEELGVKRKSLSEVRVNSPEESVKVALSVLRGEEGTPRDMVLLNASFGILVSERAGDIKEAFEMAKESIDSGKALEVLEKYVELSNKI 340          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.188e-35
Identity = 89/214 (41.59%), Postives = 118/214 (55.14%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL ALGV ID+ PE V RCV EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  L+  G +   VVH S+GLDE++  GP  + ++   +I  F   P + G+PR   E+L+GG    NA  LR VL G                  V+ K   L EGVAL  +   SG A   L   I V+
Sbjct:  122 ADVLNALGVRIDITPEHVGRCVTEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGSESIWVVHGSDGLDEITLSGPTAVAELKNGEIRTFEVTPDEAGLPRAHAEALRGGDAEANAVALRSVLEGMPSPYRDVALLNAAAALVVAGKAKDLKEGVALGAKSIDSGAAEGRLRRLIAVT 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PERMH (Anthranilate phosphoribosyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=trpD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.200e-34
Identity = 84/221 (38.01%), Postives = 126/221 (57.01%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            S C  AD++EALGV IDL PE     +D  G+GF+ +  YHPAMK V   R+++ V+T+FNILGP+ NPA   + ++GVY+++LV  +A  L   G++RA VVH  EGLDE+S     ++ +V    I  +S  P D+GI R +L+ ++GG   +N ++   +L G +R                    V+++ EG+ LA+E   S KA   L+   E SK
Sbjct:  117 SKCGSADIMEALGVKIDLSPEQAAEAIDRIGLGFLFAPVYHPAMKNVIRQRREIGVRTIFNILGPLSNPAGAKYQLLGVYDKDLVEPVARVLSLLGIERAYVVHGMEGLDEVSITTDTMVAEVDGGDISVYSVKPEDFGIERASLDDIRGGDLDFNLQIALDILEGKDRSRKTDFVSLNAGFAFHAVGVVDSVKEGIELAKETIYSKKAYEILEKLREYSK 337          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_PELPD (Anthranilate phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=trpD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.200e-34
Identity = 79/220 (35.91%), Postives = 122/220 (55.45%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 659
            S C  ADVLE LGV +D+ PE V +C+ + GIGF+ +   H AM++    R+++ ++T+FNILGP+ NPA     V+GVY   LV K+A  L R G +   VVH  +G+DE++     LI +VT   +   +  P + G  RC+++ L+GG    NA+++R VL G  G                + +  T  + +ALA E   SG+A+  L   I+++K
Sbjct:  130 SLCGSADVLEKLGVNLDITPETVEQCITKIGIGFLFAPALHGAMRYAIGPRREIGIRTIFNILGPLTNPAGADCQVMGVYRPGLVEKLAGVLHRLGCRHGFVVHGMDGMDEITTTTETLIAEVTTSGVSICTIHPEELGFSRCSMDELRGGDATANADIVRSVLQGVAGPRRDIVLINAAYALVAADRAATPEQAIALAAEAIDSGRAMEQLRKLIQITK 349          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_COLP34.124e-3535.98Anthranilate phosphoribosyltransferase OS=Colwelli... [more]
TRPD_METMA7.035e-3538.92Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_METKA7.035e-3539.11Anthranilate phosphoribosyltransferase OS=Methanop... [more]
TRPD_LARHH7.035e-3537.84Anthranilate phosphoribosyltransferase OS=Laribact... [more]
TRPD_EUBE27.035e-3537.33Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_CLOCE7.035e-3538.81Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_AQUAE7.035e-3537.33Anthranilate phosphoribosyltransferase OS=Aquifex ... [more]
TRPD_RHOPS9.188e-3541.59Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_PERMH1.200e-3438.01Anthranilate phosphoribosyltransferase OS=Persepho... [more]
TRPD_PELPD1.200e-3435.91Anthranilate phosphoribosyltransferase OS=Pelobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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