CF835936

Overview
NameCF835936
Unique NameCF835936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 81/213 (38.03%), Postives = 117/213 (54.93%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            AD L  LGV +D+ P  + RC+ EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGVY    V  +A  L+  G +   VVH EGLDE++  G   +  +    I  F   P D+G+ R +L++L+GG  A+NA  L+ VL G                  ++ +   L+EG+ALAR+   SG A   L   I VS
Sbjct:  122 ADALSCLGVNLDIGPAVISRCIAEAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLANPAGVRQQLVGVYAPQWVDPLAEVLRDLGSESVWVVHGEGLDEITTTGVTKVAALKDGTITNFELTPADFGLERVSLDALKGGDGAHNAAALQAVLDGAENAYRDISLANAAASLMIAGRAGDLSEGMALARQSLSSGGAKVALQRLITVS 334          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METBF (Anthranilate phosphoribosyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 77/203 (37.93%), Postives = 117/203 (57.64%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 626
            +DVL+ALG+  DL+PE VR+ ++E GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     V+GV+++ L   +A AL   G + ALVVH +G+DE++  G   + ++   K+  ++  P   G+ R   E ++GG P  NA  L  +  G++G               V   V ++ + + +A +   SGK +
Sbjct:  120 SDVLDALGIKTDLEPEAVRQTIEEIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGTKGQVIGVFDKKLCEPIAYALAELGTEHALVVHGDGMDEITNTGETYVAELKDGKVSTYTLTPEALGMLRANPEDIKGGTPKENARDLLCIFKGQKGPKRDIVVMNAAAALYVGGIVGSIRQAIPIAEDAIDSGKVM 322          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 84/213 (39.44%), Postives = 125/213 (58.69%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            S+   ADVLE +GV I+ +P  V   ++  GIGFM++  +HPAMK V   R++L ++TVFNILGP+ NPA     V+GVY+ +LV  MA AL R  ++RALVVH +GLDE++  G  ++ +VT ++I  ++  P D G+    +E++ GG P  NA  LR +++G+  G               V+   +T   GV  AR+   SG A + LD
Sbjct:  114 SSSGSADVLEEVGVDIEAEPPDVEETIERDGIGFMLAPVFHPAMKAVIGPRQELGMRTVFNILGPLTNPADADAQVLGVYDPDLVPVMAEALARLDVERALVVHGDGLDEIAIHGETVVAEVTDDRIAEYTITPEDMGLETRDIEAISGGSPEENAADLRGIVTGDVTGAKRDIILANAGAAIYVAGVADTHEAGVEQARQAIESGAAADKLD 326          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 89/214 (41.59%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL +LGV IDL PE V RCV E GIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +   +I  F   P + G+PRC   +L+GG    NA  L+ VL+G+                 V+ +   L EGVAL  +   SG A   L   I VS
Sbjct:  122 ADVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMVGVFSRQWVQPLAQVLKNLGSESAWVVHGSDGLDEITLTGPTFVSSLHNGEIRNFEVTPEEAGLPRCEPGALKGGDADANAIALQSVLNGKPSAYRDVALMNAAAALVVAGRAKDLKEGVALGAKSLDSGAANARLKHLIAVS 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD2_STRCO (Anthranilate phosphoribosyltransferase 2 OS=Streptomyces coelicolor GN=trpD2 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 84/219 (38.36%), Postives = 115/219 (52.51%), Query Frame = 3
Query:    3 SACRCADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            SAC  ADVLE LGV IDL  E    C+D  GI F+ +  +HPA +     R++L  +TVFN+LGP+ NP+      +GV +  LV  M   L+R G+ RALV HS +G+DE+S   P  ++++   +     FDP ++G+ R     L GG  A NA VLRRVL+G RG               V+    T ++G+ LA      G A   LD W   S
Sbjct:  106 SACGSADVLEELGVRIDLGAEEAAACLDRTGITFLFAPVFHPAFRHTAGPRRELGARTVFNLLGPLCNPSGARLRTLGVPSRELVEPMTEVLERLGVTRALVFHSADGMDELSTAAPAHLVELRDGRRTTHRFDPAEHGLARSRPGDLAGGDRAVNAAVLRRVLAGGRGPARDVVLLNAAAALRVAGVAGTWSDGLRLAASAVDGGAAAGLLDRWAHAS 324          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.491e-34
Identity = 83/208 (39.90%), Postives = 122/208 (58.65%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            ADV+E+LGV IDL PE + RC+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  ++GV++ +LV     ALQR G + ALVV+  +G+DE+S     ++ ++   +I  +   P D+G+   +  +L+   P  + E+L  VL GE G                +    T+A+G+A AR    SG AL  L+
Sbjct:  125 ADVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHHPAMKNVAPVRKELGVRTLFNILGPLTNPAGAPNILMGVFHPDLVGIQVRALQRLGAEHALVVYGRDGMDEVSLGAATMVGELKNGEITEYEIHPEDFGLAMSSNRALKVETPEQSREMLLSVLRGEPGSAREIVCLNAGVALYAANVAATMADGIARARAALDSGAALARLE 332          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METPB (Anthranilate phosphoribosyltransferase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=trpD PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.560e-34
Identity = 86/214 (40.19%), Postives = 115/214 (53.74%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 656
            ADVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V PVR +L  +T+FN+LGP+ NPA V   V GV        +   L   G +R   VH S+GLDE++  GP  ++ +    +  F+ DP + G+P  TL+ L+GG P +NA  L  VL G R                V+    TLAEGVA A+    SG A  TL   + VS
Sbjct:  122 ADVLVALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAPVRTELPFRTIFNMLGPLSNPAGVTAQVFGVSRPAWAEPLTRVLATLGSRRVWTVHGSDGLDEITTTGPTAVIALEDGALSHFTIDPREVGLPLATLDDLRGGDPDHNAAALSAVLEGARSAYRDIAVLNAGAGLVVAGAAGTLAEGVARAQGAIDSGAARATLARLVAVS 335          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.778e-34
Identity = 78/203 (38.42%), Postives = 117/203 (57.64%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 626
            +DVLEALG+ +DL P  VR+ +++ GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     VVGV+++ L   +A AL   G + ALVVH +G+DE+S  G   + ++   ++  ++  P   G+ R   E ++GG P  NA  L  +  G++G               VS  V ++ + + +A +   SGK +
Sbjct:  123 SDVLEALGIKVDLTPGQVRKTIEKIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGAKGQVVGVFDKKLCEPIAYALAELGTEHALVVHGDGMDEISNTGETFVAELKDGEVSTYTITPEAMGMLRAKPEDIKGGTPKENARDLLCIFKGQKGPKRDLVILNAAAALYVSGIVGSIRQAIPIAEDAIDSGKVM 325          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_ANADE (Anthranilate phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=trpD PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.778e-34
Identity = 80/206 (38.83%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTL 635
            ADVL ALGV +D D E V RC++E GIGF+ + + HPA K +  VR++L V+T+FN+LGP+ NPA     V+GVY    V  +   L   G   A VVH EGLDE++  G   + +V    +ER++  P D G+PR     L GG  A NA ++  VL G++G                +     L +GVA A     SG A   L
Sbjct:  121 ADVLAALGVNVDADKETVERCIEEVGIGFLFAVRLHPAFKAIAGVRRELGVRTIFNLLGPLANPAGARHQVLGVYEARWVPVLGGVLAALGAAHAFVVHGEGLDEIAVTGMTHVCEVKDGAVERYTIRPEDLGLPRRDAAELAGGDAAANARIVTHVLEGQQGGPRDAVLANAAAALVCAGAATDLRDGVARAARSIDSGAAREKL 326          
BLAST of CF835936 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.016e-33
Identity = 82/208 (39.42%), Postives = 119/208 (57.21%), Query Frame = 3
Query:   18 ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 638
            ADV+EALG+ I L PE + RC+ E GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  +VGV++ +LV     ALQR G +  LVV+  +G+DE S     L+ ++   +I  +   P D+G+   +  +L+   P  + ++L  VL G+ G                +    ++A G+ALAR    SG AL  L+
Sbjct:  125 ADVMEALGIHIHLAPEAIARCIAEVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAEAPHVLVGVFHPDLVGIQVRALQRLGAEHVLVVYGRDGMDEASLGAATLVGELKNGQISEYDIHPEDFGLAMTSNRALKVDTPEQSRDMLLGVLRGQPGAAHDTVCLNAGVALYAANVAESIAAGLALARAAIASGAALAKLE 332          
The following BLAST results are available for this feature:
BLAST of CF835936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHIME2.673e-3438.03Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_METBF2.673e-3437.93Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_HALMA2.673e-3439.44Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_BRAJA2.673e-3441.59Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD2_STRCO2.673e-3438.36Anthranilate phosphoribosyltransferase 2 OS=Strept... [more]
TRPD_ACIAC3.491e-3439.90Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_METPB4.560e-3440.19Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METAC7.778e-3438.42Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_ANADE7.778e-3438.83Anthranilate phosphoribosyltransferase OS=Anaeromy... [more]
TRPD_VEREI1.016e-3339.42Anthranilate phosphoribosyltransferase OS=Verminep... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835936 ID=CF835936; Name=CF835936; organism=Citrus sinensis; type=EST; length=742bp
CTTCTGCATGTCGATGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATT
GACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGG
TTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAG
TGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATG
TTGAATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAA
CTTGGTACTCAAAATGGCCAATGCATTGCAACGATTTGGCCTGAAAAGAG
CATTGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCT
GGTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGA
TCCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTG
GAGGCCCAGCATATAATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAA
AGAGGGGCAATAGCTGATGCATTAATCCTAAATGCTGCAGCAGCGCTGTT
GGTCAGTTGCAAAGTGAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTG
AAATTCAATTATCAGGGAAAGCTCTTAATACACTGGATTTATGGATAGAA
GTCTCAAAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGA
AAGACTTCATTGCAGTACCATGAATAACAGGTAAGTCAAAAG
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