CF835953

Overview
NameCF835953
Unique NameCF835953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 3.005e-94
Identity = 159/196 (81.12%), Postives = 178/196 (90.82%), Query Frame = -2
Query:  284 PDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 871
            P+F+ D  ++K FL QILRG+AYCHSHRVLHRDLKPQNLLIDR +N +KLADFGLARAFGIPVRTFTHEVVTLWYRAPE+LLGSRHYSTPVDVWSVGCIFAEMVNQ+PLFPGDSEIDEL KIFR++GTPNED WPGVTSLPDFKS+FPKWP KEL T+V NL   G+DLL KML +DPS+RITA+ ALEHEYF+D+
Sbjct:   82 PEFSQDLHMVKMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELHKIFRIIGTPNEDIWPGVTSLPDFKSSFPKWPPKELATIVPNLGATGLDLLCKMLQLDPSKRITAKKALEHEYFKDI 277          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.711e-77
Identity = 134/199 (67.34%), Postives = 167/199 (83.92%), Query Frame = -2
Query:  251 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP*YLLYML 847
            LIK++L+Q+L+G+++CHSHRV+HRDLKPQNLLI+    A+KLADFGLARAFG+P+RT+THEVVTLWYRAPEILLGS+ Y+T VD+WS+GCIFAEMV ++ LFPGDSEID+LF+IFR+LGTP+EDTWPGVT LPD+K +FPKW  K L  +V NLEP G DLL ++L  DPS+RITA++AL H YF   E  P    Y+L
Sbjct:  103 LIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINE-LGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGVTQLPDYKGSFPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAKTALAHPYFSSPEPSPAARQYVL 300          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.124e-75
Identity = 132/187 (70.59%), Postives = 156/187 (83.42%), Query Frame = -2
Query:  287 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 847
            +IK F+ Q++RGI +CHSHRVLHRDLKPQNLLID+  N LKLADFGLARAFG+P+R +THEVVTLWYRAPEILLG + YST VD+WSVGCIFAEM N++PLFPGDSEIDE+F+IFR+LGTPNE+ WP V  LPDFKS+FP+W  K L   V +L+  GIDLL +ML  DPSRRI+A+ AL H YF D
Sbjct:  109 MIKRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGN-LKLADFGLARAFGVPLRAYTHEVVTLWYRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIWPDVNYLPDFKSSFPQWKKKPLSEAVPSLDANGIDLLDQMLVYDPSRRISAKRALIHPYFND 294          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.025e-74
Identity = 128/192 (66.67%), Postives = 156/192 (81.25%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLG+  YSTPVDVWS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SLPD+K+ FPKW S  L + V+NL+  GIDLL+KML  DP +RI+AR A+ H YF D++
Sbjct:  101 DPMLVKSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNEVWPDVESLPDYKNTFPKWKSGNLASTVKNLDKNGIDLLTKMLIYDPPKRISARQAMTHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.454e-74
Identity = 127/190 (66.84%), Postives = 156/190 (82.11%), Query Frame = -2
Query:  287 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 856
            DPRL++ F YQ++ G+ +CHS R++HRDLKPQNLLID+  N LKLADFGLAR+FG+P+R +THE+VTLWYRAPE+LLGSRHYST VD+WSVGCIFAEM+ + PLFPGDSEIDE+FKIF+VLGTPNE+ WPGVT L D+KS FP+W   +L  VV N E   I+LLS ML  DP+ RI+A+ AL+  Y RD
Sbjct:  107 DPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGN-LKLADFGLARSFGVPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIFAEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDYKSTFPRWKRMDLHKVVPNGEEDAIELLSAMLVYDPAHRISAKRALQQNYLRD 295          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.511e-74
Identity = 126/188 (67.02%), Postives = 162/188 (86.17%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            L+K++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+ +   +KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEM+ ++ LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++L  VV  L+  G DLL +ML  DP++RI+A++AL H +FRDV
Sbjct:  103 LVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAQ-GEIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMITRKALFPGDSEIDQLFRIFRTLGTPDESIWPGVTSMPDYKPSFPKWARQDLSKVVPPLDEDGRDLLGQMLIYDPNKRISAKNALVHRFFRDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.714e-73
Identity = 128/188 (68.09%), Postives = 161/188 (85.64%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    A+KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.714e-73
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+K+ FPKW    L ++V+NL+  G+DLL+KML  +P +RI+AR A+ H YF D++
Sbjct:  101 DPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKGGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.714e-73
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+K+ FPKW    L ++V+NL+  G+DLL+KML  +P +RI+AR A+ H YF D++
Sbjct:  101 DPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKEGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.714e-73
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGL+RAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+KS FPKW    L ++V+NL+  G+DLL+KML  +P +RI+AR A+ H YF D++
Sbjct:  101 DPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKSTFPKWKGGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
The following BLAST results are available for this feature:
BLAST of CF835953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2B_ANTMA3.005e-9481.12Cell division control protein 2 homolog B (Fragmen... [more]
CDK3_HUMAN9.711e-7767.34Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDC28_CANAL3.124e-7570.59Cell division control protein 28 OS=Candida albica... [more]
CDC2_CARAU2.025e-7466.67Cell division control protein 2 homolog OS=Carassi... [more]
CDC2_SCHPO3.454e-7466.84Cell division control protein 2 OS=Schizosaccharom... [more]
CDK2_CARAU4.511e-7467.02Cell division protein kinase 2 OS=Carassius auratu... [more]
CDK2_HUMAN1.714e-7368.09Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDC2_ORYLU1.714e-7366.15Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA1.714e-7366.15Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYCU1.714e-7366.15Cell division control protein 2 homolog OS=Oryzias... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835953 ID=CF835953; Name=CF835953; organism=Citrus sinensis; type=EST; length=872bp
TTTTTTTTTTTTTTTTTAATTCAATTTGGTGTATTACATATCAACTATTT
AAAAGAAAAACTGGCACAAACATTTATCCACAAGATCAAGAAAGCCGCGA
ATACACGATTACAAACTAGGCAAATCCAGAGATGACTGTAAAAAGCCATT
CCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTAAAGACAGTCGGCAAA
TTTCGCAAACAATCAAAACCGAAGGCTTCACAATAATGTCAACACTCTAA
TAGCATATACAACAGATATTAGGGTACAAATTCGACGTCCCTGAAGTATT
CATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTGCTTGGATCCATGCAG
AGCATTTTAGAAAGGAGATCAATGCCAGCTGGCTCAAGATTTCGAACAAC
AGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGGCAGATTTAAAGTCAG
GCAATGAAGTCACTCCAGGCCATGTGTCCTCATTAGGTGTTCCCAAGACT
CTGAAGATCTTGAATAACTCATCAATCTCAGAGTCTCCTGGAAACAATGG
CCGCTGGTTCACCATCTCAGCAAATATACATCCCACCGACCACACATCAA
CTGGAGTAGAGTAATGGCGAGATCCTAGTAATATTTCAGGTGCTCTGTAC
CACAATGTCACCACCTCATGTGTAAATGTCCTAACAGGAATACCAAAAGC
CCTGGCCAGTCCAAAATCTGCTAGCTTTAGTGCATTCGTACGACGATCTA
TTAGCAAATTTTGTGGTTTCAAATCTCGATGAAGAACCCGGTGAGAATGG
CAGTAGGCAATGCCACGTAGAATTTGATAAAGGAATGTTTTTATCAGACG
AGGATCATTAGCAAAATCTGGG
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