CF835953

Overview
NameCF835953
Unique NameCF835953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.239e-73
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            DP L+K++LYQIL GI +CH  RVLHRDLKPQNLLID +   +KLADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+K+ FPKW    L ++V+NL+  G+DLL+KML  +P +RI+AR A+ H YF D++
Sbjct:  101 DPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWMEGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.819e-73
Identity = 127/188 (67.55%), Postives = 161/188 (85.64%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.819e-73
Identity = 127/188 (67.55%), Postives = 161/188 (85.64%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.819e-73
Identity = 127/188 (67.55%), Postives = 161/188 (85.64%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.819e-73
Identity = 129/186 (69.35%), Postives = 155/186 (83.33%), Query Frame = -2
Query:  290 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 847
            ++K F+ Q++ GI YCHSHRVLHRDLKPQNLLIDR  N LKLADFGLARAFG+P+RT+THEVVTLWYRAPEILLG R YST VD+WSVG IFAEM  ++PLFPGDSEIDE+FKIF++LGTP+E+TWPGVTS PDFK++FPKW  ++   +V  LE  G+DLL  ML  DP+RRI+A+ A  H YF+
Sbjct:  124 MVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGN-LKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGGRQYSTGVDMWSVGAIFAEMCTRKPLFPGDSEIDEIFKIFKLLGTPDENTWPGVTSFPDFKASFPKWKREDTRKLVPGLERNGLDLLDAMLEYDPARRISAKQACMHPYFQ 308          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.988e-73
Identity = 127/188 (67.55%), Postives = 161/188 (85.64%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            LIK++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LLS+ML  DP++RI+A++AL H +F+DV
Sbjct:  103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINA-DGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 273.478 bits (698), Expect = 1.111e-72
Identity = 127/188 (67.55%), Postives = 160/188 (85.11%), Query Frame = -2
Query:  284 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 847
            L+K++L+Q+L+G+A+CHSHRVLHRDLKPQNLLI+    A+KLADFGLARAFG+PVRTFTHEVVTLWYRAPEILLG + YST VD+WS+GCIFAEM+ +R LFPGDSEID+LF+IFR LGTP+E +WPGVT++PD+KS FPKW  ++   VV  L+  G DLL++ML  D ++RI+A+ AL H +FRDV
Sbjct:  103 LVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINS-DGAIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMITRRALFPGDSEIDQLFRIFRTLGTPDEVSWPGVTTMPDYKSTFPKWIRQDFSKVVPPLDEDGRDLLAQMLQYDSNKRISAKVALTHPFFRDV 289          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.475e-72
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D   +K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SL D+K+ FPKW    LGT V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  101 DRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNDVWPDVESLQDYKNTFPKWKPGSLGTHVQNLDEDGLDLLSKMLIYDPAKRISGKMALNHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 2.475e-72
Identity = 125/192 (65.10%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+KS FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  101 DSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKSTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 3.233e-72
Identity = 121/188 (64.36%), Postives = 159/188 (84.57%), Query Frame = -2
Query:  281 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 844
            IK+F+YQ+L+G+A+CH HRVLHRDLKPQNLLI+R+   LKLADFGLARAFGIPVRT++HEVVTLWYRAP++L+GSR YSTP+D+WS GCIFAEM + RPLFPG    D+LF+IF++LGTPNE++WP +T LP++K+ FP  P+ +L ++V  L+  G++LLSKML  DP++RITA +AL+H YF  +E
Sbjct:  103 IKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRK-GELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESWPSITELPEYKTDFPVHPAHQLSSIVHGLDEKGLNLLSKMLQYDPNQRITAAAALKHPYFDGLE 289          
The following BLAST results are available for this feature:
BLAST of CF835953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_ORYJA2.239e-7366.15Cell division control protein 2 homolog OS=Oryzias... [more]
CDK2_RAT3.819e-7367.55Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MESAU3.819e-7367.55Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDK2_CRIGR3.819e-7367.55Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDC2_AJECA3.819e-7369.35Cell division control protein 2 OS=Ajellomyces cap... [more]
CDK2_BOVIN4.988e-7367.55Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDK2_XENLA1.111e-7267.55Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDC2_CHICK2.475e-7266.15Cell division control protein 2 homolog OS=Gallus ... [more]
CDC2_BOVIN2.475e-7265.10Cell division control protein 2 homolog OS=Bos tau... [more]
CDK5_DICDI3.233e-7264.36Cell division protein kinase 5 homolog OS=Dictyost... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835953 ID=CF835953; Name=CF835953; organism=Citrus sinensis; type=EST; length=872bp
TTTTTTTTTTTTTTTTTAATTCAATTTGGTGTATTACATATCAACTATTT
AAAAGAAAAACTGGCACAAACATTTATCCACAAGATCAAGAAAGCCGCGA
ATACACGATTACAAACTAGGCAAATCCAGAGATGACTGTAAAAAGCCATT
CCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTAAAGACAGTCGGCAAA
TTTCGCAAACAATCAAAACCGAAGGCTTCACAATAATGTCAACACTCTAA
TAGCATATACAACAGATATTAGGGTACAAATTCGACGTCCCTGAAGTATT
CATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTGCTTGGATCCATGCAG
AGCATTTTAGAAAGGAGATCAATGCCAGCTGGCTCAAGATTTCGAACAAC
AGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGGCAGATTTAAAGTCAG
GCAATGAAGTCACTCCAGGCCATGTGTCCTCATTAGGTGTTCCCAAGACT
CTGAAGATCTTGAATAACTCATCAATCTCAGAGTCTCCTGGAAACAATGG
CCGCTGGTTCACCATCTCAGCAAATATACATCCCACCGACCACACATCAA
CTGGAGTAGAGTAATGGCGAGATCCTAGTAATATTTCAGGTGCTCTGTAC
CACAATGTCACCACCTCATGTGTAAATGTCCTAACAGGAATACCAAAAGC
CCTGGCCAGTCCAAAATCTGCTAGCTTTAGTGCATTCGTACGACGATCTA
TTAGCAAATTTTGTGGTTTCAAATCTCGATGAAGAACCCGGTGAGAATGG
CAGTAGGCAATGCCACGTAGAATTTGATAAAGGAATGTTTTTATCAGACG
AGGATCATTAGCAAAATCTGGG
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