CF835953

Overview
NameCF835953
Unique NameCF835953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.233e-72
Identity = 122/191 (63.87%), Postives = 156/191 (81.68%), Query Frame = -2
Query:  281 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 853
            P+LIK++LYQ+L+G+AY H HR+LHRDLKPQNLLIDR+  ALKLADFGLARA  IPVR +THE+VTLWYRAPE+LLGS+ YS PVD+WSVGCIF EM+N++PLF GD EID++F+IFRVLGTP++  WPGVT LP++ S FP WP +    +    EP  +DL++KML  +PS+RI+A+ AL H YF D++
Sbjct:  103 PQLIKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQ-GALKLADFGLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSIWPGVTKLPEYVSTFPNWPGQPYNKIFPRCEPLALDLIAKMLQYEPSKRISAKEALLHPYFGDLD 292          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.233e-72
Identity = 127/192 (66.15%), Postives = 156/192 (81.25%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K++FPKW    L   V+N++  G+DLL+KML  DP++RI+AR AL H YF D++
Sbjct:  101 DTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.514e-72
Identity = 124/192 (64.58%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  101 DSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.202e-72
Identity = 124/192 (64.58%), Postives = 156/192 (81.25%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL+H YF D++
Sbjct:  101 DSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.228e-71
Identity = 122/187 (65.24%), Postives = 152/187 (81.28%), Query Frame = -2
Query:  287 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 847
            ++K F+ Q+ +GIAYCHSHR+LHRDLKPQNLLI++  N LKL DFGLARAFG+P+R +THE+VTLWYRAPE+LLG + YST VD WS+GCIFAEM N++P+F GDSEID++FKIFRVLGTPNE  WP +  LPDFK +FP+W  K+L  VV +L+P GIDLL K+L  DP  RI+AR A  H YF++
Sbjct:  112 IVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGN-LKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQE 297          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.604e-71
Identity = 126/186 (67.74%), Postives = 151/186 (81.18%), Query Frame = -2
Query:  290 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 847
            ++K F+ Q++ GI +CHSHRVLHRDLKPQNLLIDR  N LKLADFGLARAFG+P+RT+THEVVTLWYR+PEILLG R YST VD+WS G IFAEM  ++PLFPGDSEIDE+FKIFR+LGTP+E  WPGVTS PDFK  FPKW  +++  VV  LE  G+DLL  +L  DP+RRI+A+ A  H YF+
Sbjct:  123 MVKKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDGN-LKLADFGLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYSTGVDMWSCGAIFAEMCTRKPLFPGDSEIDEIFKIFRILGTPDETIWPGVTSFPDFKPTFPKWKREDIQNVVPGLEEDGLDLLEALLEYDPARRISAKQACMHPYFQ 307          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 2.095e-71
Identity = 122/192 (63.54%), Postives = 154/192 (80.21%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THE +TLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  101 DSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEAITLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 2.095e-71
Identity = 127/192 (66.15%), Postives = 155/192 (80.73%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++LYQIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRA E+LLGS  YSTPVDVWSVG IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+N++  G+DLLSKML  DP++RI+AR A+ H YF D++
Sbjct:  101 DTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLFHGDSEIDQLFRIFRSLGTPNNEVWPEVESLQDYKNTFPKWKGGSLSSNVKNIDEDGLDLLSKMLVYDPAKRISARKAMLHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 268.855 bits (686), Expect = 2.737e-71
Identity = 123/192 (64.06%), Postives = 156/192 (81.25%), Query Frame = -2
Query:  281 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 856
            D  L+K++L+QIL+GI +CHS RVLHRDLKPQNLLID +   +KLADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL+H YF D++
Sbjct:  101 DSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDK-GTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLD 291          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.562e-69
Identity = 122/189 (64.55%), Postives = 153/189 (80.95%), Query Frame = -2
Query:  281 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 847
            L+K++LYQIL+GI +CH+ RVLHRDLKPQNLLID +   +KLADFGLARAFGIPVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS+G IFAE+ +++PLF GDSEID+LF+I  + GTPN + WP V SL D+K+ FPKW    L   V+N++  G+DLL+KML  DP++RI+AR AL H YF D++
Sbjct:  104 LVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSK-GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIASKKPLFHGDSEIDQLFRISELWGTPNNEVWPEVESLQDYKNTFPKWKGGSLAANVKNIDKEGLDLLAKMLVYDPAKRISARKALLHPYFDDLD 291          
The following BLAST results are available for this feature:
BLAST of CF835953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_DICDI3.233e-7263.87Cell division control protein 2 homolog OS=Dictyos... [more]
CDC2A_XENLA3.233e-7266.15Cell division control protein 2-A OS=Xenopus laevi... [more]
CDC2_PONAB5.514e-7264.58Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_RAT7.202e-7264.58Cell division control protein 2 homolog OS=Rattus ... [more]
CDC28_YEAST1.228e-7165.24Cell division control protein 28 OS=Saccharomyces ... [more]
CDC2_EMENI1.604e-7167.74Cell division control protein 2 OS=Emericella nidu... [more]
CDC2_HUMAN2.095e-7163.54Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2B_XENLA2.095e-7166.15Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2_MOUSE2.737e-7164.06Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2_RANDY2.562e-6964.55Cell division control protein 2 homolog OS=Rana dy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835953 ID=CF835953; Name=CF835953; organism=Citrus sinensis; type=EST; length=872bp
TTTTTTTTTTTTTTTTTAATTCAATTTGGTGTATTACATATCAACTATTT
AAAAGAAAAACTGGCACAAACATTTATCCACAAGATCAAGAAAGCCGCGA
ATACACGATTACAAACTAGGCAAATCCAGAGATGACTGTAAAAAGCCATT
CCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTAAAGACAGTCGGCAAA
TTTCGCAAACAATCAAAACCGAAGGCTTCACAATAATGTCAACACTCTAA
TAGCATATACAACAGATATTAGGGTACAAATTCGACGTCCCTGAAGTATT
CATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTGCTTGGATCCATGCAG
AGCATTTTAGAAAGGAGATCAATGCCAGCTGGCTCAAGATTTCGAACAAC
AGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGGCAGATTTAAAGTCAG
GCAATGAAGTCACTCCAGGCCATGTGTCCTCATTAGGTGTTCCCAAGACT
CTGAAGATCTTGAATAACTCATCAATCTCAGAGTCTCCTGGAAACAATGG
CCGCTGGTTCACCATCTCAGCAAATATACATCCCACCGACCACACATCAA
CTGGAGTAGAGTAATGGCGAGATCCTAGTAATATTTCAGGTGCTCTGTAC
CACAATGTCACCACCTCATGTGTAAATGTCCTAACAGGAATACCAAAAGC
CCTGGCCAGTCCAAAATCTGCTAGCTTTAGTGCATTCGTACGACGATCTA
TTAGCAAATTTTGTGGTTTCAAATCTCGATGAAGAACCCGGTGAGAATGG
CAGTAGGCAATGCCACGTAGAATTTGATAAAGGAATGTTTTTATCAGACG
AGGATCATTAGCAAAATCTGGG
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