CF835953

Overview
NameCF835953
Unique NameCF835953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CSK22_BOVIN (Casein kinase II subunit alpha' OS=Bos taurus GN=CSNK2A2 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 7.057e-27
Identity = 66/199 (33.17%), Postives = 110/199 (55.28%), Query Frame = -2
Query:  284 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPG------VTSLPDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 844
            I+ ++Y++L+ + YCHS  ++HRD+KP N++ID +   L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT   D   G      +   P F     +   K     + +     + P  +DLL K+L  D  +R+TA+ A+EH YF  V
Sbjct:  134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT---DELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPV 328          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.057e-27
Identity = 67/195 (34.36%), Postives = 107/195 (54.87%), Query Frame = -2
Query:  293 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 844
            I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A+EH YF
Sbjct:  133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 65/195 (33.33%), Postives = 111/195 (56.92%), Query Frame = -2
Query:  284 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNE-------DTWPG-VTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 844
            I+ + YQI RG+ Y H   V HRD+KP N+L+D  T  LK+ DFG A+       + ++ + + +YRAPE+++G   Y+T +D+W +GC+  EM+  + +F G   + +L +I ++LG P++         + G + S P F  +  +   K  G    +  P GIDLL K+L  +P +R++ R  L H++F ++
Sbjct:  141 IRLYTYQIARGMLYLHGLGVCHRDIKPSNVLVDPETGVLKICDFGSAKKLEHNQPSISY-ICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDKRFIFFSNPAYDGPLFSKPLFSGSSQQRFEKYFG----HSGPDGIDLLMKILVYEPQQRLSPRRILAHQFFNEL 330          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 71/197 (36.04%), Postives = 108/197 (54.82%), Query Frame = -2
Query:  287 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS-RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR----------NLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 844
            IK  +YQI+R + Y HS  ++HRDLKP NL +   ++ L + DFGLAR+      + T  V T WYR+PE++      Y+   D+WS+GCI AE++   PLFPGD    +  +I ++ G+P+E+    +T + +  S+  K   +   T  R          N     IDLL K+L +DP +RIT   A++H Y  +
Sbjct:  229 IKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDSD-LMILDFGLARSLEKKDTSLTQYVQTRWYRSPEVIYWKIDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPDEEL---LTKIENDNSSAIKAVIQSYTTHKRRNFRDVFSAHNPSEDFIDLLEKLLVLDPEKRITVEEAIQHPYLAE 421          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PIT1_SCHPO (Sporulation protein kinase pit1 OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 72/211 (34.12%), Postives = 118/211 (55.92%), Query Frame = -2
Query:  290 NDP---RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNA----LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDT----------WPGVTSLPD-FKSAFPKWPSKELGTVVR---NLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 859
            NDP     ++  + QI +G+ + H++   HRD+KP+N+LI   +++    +K+ADFGLAR        +T  V T WYRAPE+LL   +YS PVD+++ GC+  E+   +P+FPG+ + D+L+K+  +LG+P+E +          W     L +    + PK    + G +     NL  A   +LS++L  DP++R TA   L+ E+ R
Sbjct:  130 NDPLTLEQVQDIMRQIFKGLNHIHTNGFFHRDMKPENILISSNSDSSSFNVKIADFGLAREINSRP-PYTEYVSTRWYRAPELLLRDSYYSFPVDIYAAGCMAFEIATLQPIFPGNDDFDQLYKMCEILGSPDEQSQNTGDKGGGIWDRAELLANKLGISLPKMAPLDFGDLFSPPWNL--AFASMLSQLLKWDPAKRPTAEMCLDLEFCR 337          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 77/200 (38.50%), Postives = 109/200 (54.50%), Query Frame = -2
Query:  293 AND---PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTF-THEVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 862
            AND   P   + FLYQ+LRG+ + H+  V HRDLKP+N+L +     LK+ DFGLAR      P   F T  V T WYRAPE L GS    Y+  +D+WS+GCIFAEM+  +PLFPG + + +L  +  +LGTP  +    + +     +     + P         +++P  + LL ++L  DP  R +A  AL   YF
Sbjct:  117 ANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANSDCK-LKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDIMTDLLGTPPPEAIARIRNEKARRYLGNMRRKPPVPFTHKFPHVDPLALRLLHRLLAFDPKDRPSAEEALADPYF 314          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: MPK15_ARATH (Mitogen-activated protein kinase 15 OS=Arabidopsis thaliana GN=MPK15 PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 81/204 (39.71%), Postives = 111/204 (54.41%), Query Frame = -2
Query:  293 AND---PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF--GIPVRTF-THEVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTS------LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 862
            AND   P   + FLYQ+LRG+ Y H+  V HRDLKP+N+L +     LK+ DFGLAR      P   F T  V T WYRAPE L GS    Y+  +D+WSVGCIFAEM+  +PLFPG + + +L  +   LGTP  +    + +      L + +   P   SK+        +P+ + LL +++  DP  R +A  AL   YF
Sbjct:  184 ANDDLTPEHHQFFLYQLLRGLKYVHAANVFHRDLKPKNILANADCK-LKICDFGLARVSFNDAPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPGKNVVHQLDIMTDFLGTPPPEAISKIRNDKARRYLGNMRKKQPVPFSKKF----PKADPSALRLLERLIAFDPKDRPSAEEALADPYF 381          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 80/202 (39.60%), Postives = 109/202 (53.96%), Query Frame = -2
Query:  296 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTP----NEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-----------GIDLLSKMLCMDPSRRITARSALEHEY 856
            D   +   LYQ+L GI + HS  ++HRDLKP N+++ +    LK+ DFGLAR  G      T  VVT +YRAPE++LG   Y   VD+WSVGCI  EM+    LFPG   ID+  K+   LGTP     +   P V +  + +  +  +  ++L   V  L PA             DLLSKML +D S+RI+   AL+H Y
Sbjct:  124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCILGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCTEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDDALQHPY 320          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CSK21_XENLA (Casein kinase II subunit alpha OS=Xenopus laevis GN=csnk2a1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 66/195 (33.85%), Postives = 107/195 (54.87%), Query Frame = -2
Query:  293 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 844
            I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G    D+L +I +VLGT  ED +  +        P F     +   K     V +     + P  +D L K+L  D   R+TAR A++H YF
Sbjct:  133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQTRLTAREAMDHPYF 324          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.053e-26
Identity = 67/197 (34.01%), Postives = 107/197 (54.31%), Query Frame = -2
Query:  284 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGDSEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 844
            I+ ++Y++L+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+FA M+  + P F G    D+L KI +VLGT   + +         P + +L    S  P W           + P  ID L K+L  D   R+TA  A+ H YF+ V
Sbjct:  128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322          
The following BLAST results are available for this feature:
BLAST of CF835953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK22_BOVIN7.057e-2733.17Casein kinase II subunit alpha' OS=Bos taurus GN=C... [more]
CSK21_CHICK7.057e-2734.36Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
MCK1_YEAST9.217e-2733.33Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
PMK3_CAEEL1.572e-2636.04Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]
PIT1_SCHPO1.572e-2634.12Sporulation protein kinase pit1 OS=Schizosaccharom... [more]
MPK9_ARATH1.572e-2638.50Mitogen-activated protein kinase 9 OS=Arabidopsis ... [more]
MPK15_ARATH1.572e-2639.71Mitogen-activated protein kinase 15 OS=Arabidopsis... [more]
MK08_XENLA1.572e-2639.60Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
CSK21_XENLA1.572e-2633.85Casein kinase II subunit alpha OS=Xenopus laevis G... [more]
CSK2A_MAIZE2.053e-2634.01Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835953 ID=CF835953; Name=CF835953; organism=Citrus sinensis; type=EST; length=872bp
TTTTTTTTTTTTTTTTTAATTCAATTTGGTGTATTACATATCAACTATTT
AAAAGAAAAACTGGCACAAACATTTATCCACAAGATCAAGAAAGCCGCGA
ATACACGATTACAAACTAGGCAAATCCAGAGATGACTGTAAAAAGCCATT
CCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTAAAGACAGTCGGCAAA
TTTCGCAAACAATCAAAACCGAAGGCTTCACAATAATGTCAACACTCTAA
TAGCATATACAACAGATATTAGGGTACAAATTCGACGTCCCTGAAGTATT
CATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTGCTTGGATCCATGCAG
AGCATTTTAGAAAGGAGATCAATGCCAGCTGGCTCAAGATTTCGAACAAC
AGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGGCAGATTTAAAGTCAG
GCAATGAAGTCACTCCAGGCCATGTGTCCTCATTAGGTGTTCCCAAGACT
CTGAAGATCTTGAATAACTCATCAATCTCAGAGTCTCCTGGAAACAATGG
CCGCTGGTTCACCATCTCAGCAAATATACATCCCACCGACCACACATCAA
CTGGAGTAGAGTAATGGCGAGATCCTAGTAATATTTCAGGTGCTCTGTAC
CACAATGTCACCACCTCATGTGTAAATGTCCTAACAGGAATACCAAAAGC
CCTGGCCAGTCCAAAATCTGCTAGCTTTAGTGCATTCGTACGACGATCTA
TTAGCAAATTTTGTGGTTTCAAATCTCGATGAAGAACCCGGTGAGAATGG
CAGTAGGCAATGCCACGTAGAATTTGATAAAGGAATGTTTTTATCAGACG
AGGATCATTAGCAAAATCTGGG
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