CF835953

Overview
NameCF835953
Unique NameCF835953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.668e-52
Identity = 109/200 (54.50%), Postives = 131/200 (65.50%), Query Frame = -2
Query:  293 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVT---------SLPDFKSAF-PKWPSKELGTV--VRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 856
            D   I+ F+  +LRG+A+CH   VLHRDLKPQNLLI R    LKL DFGL R+F IPVR FT+EVVTLWYR P++LLGS  Y  PVDVWSVGCIF+EM    PLF G ++ D+L +IFR LGTPN   WP +          S P+F   F P+W S  LG+V     L  AG+DLL ++L  +PS RITA  AL H YF
Sbjct:  100 DAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKE-LKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRIFRFLGTPNNRVWPSMNQYPNSNNMLSQPEFLQNFEPEW-SNVLGSVPGYEKLGCAGVDLLERLLRYEPSERITAADALNHPYF 297          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.179e-52
Identity = 98/192 (51.04%), Postives = 137/192 (71.35%), Query Frame = -2
Query:  287 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN-----LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 847
            L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR+Y T +D+WS GCI AEM+  +PLFPG ++ ++L  IF  +GTP E TWP VT L  +    P    ++L  +++N     L+   +DLL  +L ++P  R++A+ AL H +F +
Sbjct:  109 LVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRNYCTSIDIWSCGCILAEMIMGKPLFPGSNDEEQLKLIFDTMGTPVEQTWPQVTQLAKYNPLLPPHMPRDLKQLLQNNTEEVLDDNVVDLLHGLLQLNPDARLSAKDALNHPWFAE 299          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.853e-52
Identity = 95/192 (49.48%), Postives = 135/192 (70.31%), Query Frame = -2
Query:  287 LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKEL-----GTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 847
            L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ +   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR Y T +D+WS GCI AEM+  + LFPG ++ ++L  IF  +GTP E TW GV+ LP +    P +P+K++      T    +    ++L+  +L ++PS R++A+ AL H  F +
Sbjct:  111 LVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNK-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYCTSIDIWSCGCILAEMIMGKALFPGTNDDEQLKLIFETMGTPTEQTWVGVSQLPKYNPQIPLYPNKDIKQLLQATTKEQISDVLVNLIQGLLQLNPSMRLSAQQALSHPLFEE 301          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.278e-52
Identity = 97/183 (53.01%), Postives = 129/183 (70.49%), Query Frame = -2
Query:  293 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 841
            ++ +YQIL+G+A+CH H++LHRD+KPQN+LI++    +KL +FGLAR   I  R +T EVVTLWYRAPEILLG+  Y   +D+WS   IF E++N+  LF G  +ID+LFKIF  LGTP ED W GVT LP + S FPKW +K+L T+    E A +DLL KM    P +RI+A  AL+H +F
Sbjct:  103 RSIVYQILQGLAFCHYHQILHRDMKPQNILINKN-GTIKLGEFGLARLTTINDRKYTSEVVTLWYRAPEILLGATQYGGAIDIWSTAAIFGELINKEELFKGRCKIDQLFKIFSQLGTPTEDIWNGVTKLPFYLSTFPKWKAKDLHTIFHTDERA-VDLLQKMFIYTPEKRISAADALKHPFF 283          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.146e-51
Identity = 107/194 (55.15%), Postives = 132/194 (68.04%), Query Frame = -2
Query:  284 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI-DELFKIFRVLGTPNEDTWPGVTSLPDFK-SAFPKWPSKELGTVVRNLEPA--GIDLLSKMLCMDPSRRITARSALEHEYFRDV 853
            P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM+     FPG  +I D+L +IF VLGTPNEDTWPGV SLP FK   F  + SK L      L       DL SK+L   P  R++A++AL HEYF D+
Sbjct:  230 PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD-TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTVYSSKSLRQAWNKLSYVNHAEDLASKLLQCSPKNRLSAQAALSHEYFSDL 422          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK14_HUMAN (Cell division protein kinase 14 OS=Homo sapiens GN=CDK14 PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 3.146e-51
Identity = 107/194 (55.15%), Postives = 132/194 (68.04%), Query Frame = -2
Query:  284 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI-DELFKIFRVLGTPNEDTWPGVTSLPDFK-SAFPKWPSKELGTVVRNLEPA--GIDLLSKMLCMDPSRRITARSALEHEYFRDV 853
            P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YST +D+W VGCIF EM+     FPG  +I D+L +IF VLGTPNEDTWPGV SLP FK   F  + SK L      L       DL SK+L   P  R++A++AL HEYF D+
Sbjct:  230 PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD-TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSSKNLRQAWNKLSYVNHAEDLASKLLQCSPKNRLSAQAALSHEYFSDL 422          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.109e-51
Identity = 106/204 (51.96%), Postives = 129/204 (63.24%), Query Frame = -2
Query:  278 DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWP---------GVTSLPDFKSAFPKWPSKELGT--VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 856
            D   I+ F+  +L G+ +CH   VLHRDLKP NLLI R    LKLADFGL RAFGIPV+ FT EVVTLWYR+P++LLGS  Y TPVD+WSVGCIFAEM    PLF G ++ D+L +IF+ LGTPN   WP          + S P+F+        ++  T      L P GIDLL  +L  +PS R+TA  ALEH YF  VEF
Sbjct:  100 DAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISREKE-LKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFTGKNDADQLLRIFQFLGTPNRQVWPSMDTYPNSSNMLSRPEFQQTLAATCEEQFQTNPAYAKLGPQGIDLLRWLLRYEPSERLTAAQALEHPYF-SVEF 301          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cell division protein kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 1.012e-49
Identity = 98/194 (50.52%), Postives = 131/194 (67.53%), Query Frame = -2
Query:  287 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWP----SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 853
            P  +KT + Q+LRG+ + H + +LHRDLK  NLL+      LK+ DFGLAR +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCIF E++ Q+PLFPG SEID++ K+F+ LGTP+E  WPG + LP  K   F + P     K  G +   L   G DL++K L   P RRI+A   L+HEYFR+
Sbjct:  536 PGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSH-AGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSEIDQINKVFKDLGTPSEKIWPGYSELPAVKKMTFSEHPYNNLRKRFGAL---LSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRE 725          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CDK10_DICDI (Probable cyclin-dependent kinase 10 OS=Dictyostelium discoideum GN=cdk10 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.944e-49
Identity = 95/191 (49.74%), Postives = 130/191 (68.06%), Query Frame = -2
Query:  278 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK--SAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 844
            IK FL Q+LR + Y HSH ++HRDLK  NLL     N LKLADFGLAR FG P+ + T  +VTLWYR+PE+LLG + YST VD+WS+G IF E++  RPL  G++E+D++ +IF +LG PNE  WPG +SLP+FK  +  P  P   L  +V  +     DLL+++L  DP++RITA  A++H +F +  F
Sbjct:  109 IKCFLLQLLRAVEYLHSHWIIHRDLKCSNLLYGNNGN-LKLADFGLARKFGYPIESITPCMVTLWYRSPELLLGCQKYSTAVDLWSIGSIFGELLIGRPLITGNNEVDQIMRIFNLLGEPNEQIWPGFSSLPNFKRLNNIPHQPYNNLRELVPTISDTAFDLLNQLLTYDPTKRITASDAIKHPFFYENPF 298          
BLAST of CF835953 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cell division protein kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 2.944e-49
Identity = 97/194 (50.00%), Postives = 131/194 (67.53%), Query Frame = -2
Query:  287 PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWP----SKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 853
            P  +KT + Q+LRG+ + H + +LHRDLK  NLL+      LK+ DFGLAR +G P++ +T  VVT WYRAPE+LLG++ YST VD+WSVGCIF E++ Q+PLFPG+SEID++ K+F+ LGTP+E  WPG + LP  K   F + P     K  G +   L   G DL++K L   P RRI+A   L+HEYFR+
Sbjct:  521 PGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSH-AGILKVGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGAL---LSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRE 710          
The following BLAST results are available for this feature:
BLAST of CF835953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK1_LEIME1.668e-5254.50Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
PHO85_KLULA2.179e-5251.04Negative regulator of the PHO system OS=Kluyveromy... [more]
PHO85_ASHGO4.853e-5249.48Negative regulator of the PHO system OS=Ashbya gos... [more]
CDK2_ENTHI8.278e-5253.01Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK14_MOUSE3.146e-5155.15Cell division protein kinase 14 OS=Mus musculus GN... [more]
CDK14_HUMAN3.146e-5155.15Cell division protein kinase 14 OS=Homo sapiens GN... [more]
CC2H1_TRYBB4.109e-5151.96Cell division control protein 2 homolog 1 OS=Trypa... [more]
CD11B_HUMAN1.012e-4950.52Cell division protein kinase 11B OS=Homo sapiens G... [more]
CDK10_DICDI2.944e-4949.74Probable cyclin-dependent kinase 10 OS=Dictyosteli... [more]
CD11A_HUMAN2.944e-4950.00Cell division protein kinase 11A OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835953 ID=CF835953; Name=CF835953; organism=Citrus sinensis; type=EST; length=872bp
TTTTTTTTTTTTTTTTTAATTCAATTTGGTGTATTACATATCAACTATTT
AAAAGAAAAACTGGCACAAACATTTATCCACAAGATCAAGAAAGCCGCGA
ATACACGATTACAAACTAGGCAAATCCAGAGATGACTGTAAAAAGCCATT
CCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTAAAGACAGTCGGCAAA
TTTCGCAAACAATCAAAACCGAAGGCTTCACAATAATGTCAACACTCTAA
TAGCATATACAACAGATATTAGGGTACAAATTCGACGTCCCTGAAGTATT
CATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTGCTTGGATCCATGCAG
AGCATTTTAGAAAGGAGATCAATGCCAGCTGGCTCAAGATTTCGAACAAC
AGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGGCAGATTTAAAGTCAG
GCAATGAAGTCACTCCAGGCCATGTGTCCTCATTAGGTGTTCCCAAGACT
CTGAAGATCTTGAATAACTCATCAATCTCAGAGTCTCCTGGAAACAATGG
CCGCTGGTTCACCATCTCAGCAAATATACATCCCACCGACCACACATCAA
CTGGAGTAGAGTAATGGCGAGATCCTAGTAATATTTCAGGTGCTCTGTAC
CACAATGTCACCACCTCATGTGTAAATGTCCTAACAGGAATACCAAAAGC
CCTGGCCAGTCCAAAATCTGCTAGCTTTAGTGCATTCGTACGACGATCTA
TTAGCAAATTTTGTGGTTTCAAATCTCGATGAAGAACCCGGTGAGAATGG
CAGTAGGCAATGCCACGTAGAATTTGATAAAGGAATGTTTTTATCAGACG
AGGATCATTAGCAAAATCTGGG
back to top