CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20
Identity = 59/184 (32.07%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            D Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P   +   V + +++ PE+L+  + Y
Sbjct:   37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMY 209          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20
Identity = 59/184 (32.07%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            D Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P   +   V + +++ PE+L+  + Y
Sbjct:   37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMY 209          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20
Identity = 59/184 (32.07%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            D Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V     +   LVFE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P   +   V + +++ PE+L+  + Y
Sbjct:   37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMY 209          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: MK11_HUMAN (Mitogen-activated protein kinase 11 OS=Homo sapiens GN=MAPK11 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 60/179 (33.52%), Postives = 95/179 (53.07%), Query Frame = 2
Query:  248 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            +G G YG V  A +    + +A+KK+    +         RE+ LLK ++H N++ L DV      +    ++YLV   +  DL  ++  C   +++   ++  +YQ+LRG+ Y HS  ++HRDLKP N+ ++     L++ DFGLAR         T  V T WYRAPEI+L   HY+
Sbjct:   30 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN-NIVKCQALSDEH--VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQAD---EEMTGYVATRWYRAPEIMLNWMHYN 201          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 56/154 (36.36%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYL---DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            M++YE    +G+GT+  VY ARN  +N+++A+K I  E+    G+     REIS+++ ++H NIV+L +V+ S+ K+Y   EY+   +L  +       + A      + +  Q++  + +CHS  V HRDLKP+NLL+D   N LK++DFGL+
Sbjct:    9 MNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDA-----ARKYFQQLIGAVDFCHSRGVYHRDLKPENLLVDENGN-LKVSDFGLS 156          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 52/149 (34.90%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            +Y+ ++ +GEG++G V  A++  T + +ALK I R       +     REIS L+ ++H +I++L DV+ S+ ++ +V E+   +L  ++        D    + F  QI+  + YCH H+++HRDLKP+NLL+D + N +K+ADFGL+
Sbjct:   51 RYQIIKTLGEGSFGKVKLAQHVGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFAGKELFDYIVQRGKMPEDEA--RRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLN-VKIADFGLS 196          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: MK04_RAT (Mitogen-activated protein kinase 4 (Fragment) OS=Rattus norvegicus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 2
Query:  251 GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKK-----------LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHE------VVTLWYRAPEILLGSRHYS 766
            G G  G+V  A +      +A+KKI L   D      A+REI +++ + H NIV++ +V+  +              Y+V EY++ DL   ++         +L   F+YQ+LRG+ Y HS  VLHRDLKP N+ I      LK+ DFGLAR   I    ++H+      +VT WYR+P +LL   +Y+
Sbjct:    1 GCGGNGLVLSATDSRACRKVAVKKIVLS--DARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEEHAKL---FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLAR---IADQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYT 181          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 56/155 (36.13%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKT----FLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            M++YE    +G+GT+G V+ ARN  +N+++A+K +  +Q  + G+     REI+ ++ + H NIV+L +V+ +  K+Y V EY+     K  +     A   +L +     +  Q++  + YCHS  V HRDLKP+NLL+D   N LK++DFGL+
Sbjct:    9 MERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQVLKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYV-----KGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENEN-LKVSDFGLS 157          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: AURKB_BOVIN (Serine/threonine-protein kinase 12 OS=Bos taurus GN=AURKB PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 61/184 (33.15%), Postives = 100/184 (54.35%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVV--TLWYRAPEILLGSRH 760
            +D +E    +G+G +G VY AR   ++  +ALK +   Q E EGV     REI +   +QH NI+RL +  +  +++YL+ EY    +L K +     F  D +   T + ++   + YCH+ +V+HRD+KP+NLL+  R   LK+ADFG    + +   +   + +  TL Y  PE++ G  H
Sbjct:   74 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSRTF--DEQRTATIMEELADALTYCHAKKVIHRDIKPENLLLGLR-GELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRTH 250          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 65/186 (34.95%), Postives = 102/186 (54.84%), Query Frame = 2
Query:  248 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKKLYLVFEYLDLDLK---KHMDSC----PDFANDPRLIKTFLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            +G G++G+V++A+   T E++A+KK+  ++  +       RE+ L++ M H N+V L+    S     E  L LV EY+   L    KH  S     P F      +K + YQI RG+AY H+   V HRD+KPQNLL+D  T+  KL DFG A+         ++ + + +YRAPE++ G+  Y+
Sbjct:   78 VGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKN------RELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKHYTSSNQRMPIF-----YVKLYTYQIFRGLAYIHTAPGVCHRDVKPQNLLVDPLTHQCKLCDFGSAKVLVKGEANISY-ICSRYYRAPELIFGATEYT 251          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK21_HUMAN6.828e-2032.07Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]
CSK21_CHICK6.828e-2032.07Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
CSK21_BOVIN6.828e-2032.07Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]
MK11_HUMAN8.918e-2033.52Mitogen-activated protein kinase 11 OS=Homo sapien... [more]
CIPK5_ORYSJ8.918e-2036.36CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
SNF1_CANTR1.165e-1934.90Carbon catabolite-derepressing protein kinase OS=C... [more]
MK04_RAT1.165e-1934.39Mitogen-activated protein kinase 4 (Fragment) OS=R... [more]
CIPKE_ORYSJ1.165e-1936.13CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
AURKB_BOVIN1.165e-1933.15Serine/threonine-protein kinase 12 OS=Bos taurus G... [more]
KSG6_ARATH1.521e-1934.95Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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