CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 60/184 (32.61%), Postives = 102/184 (55.43%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            D YE V K+G G Y  V++  N   NE   +K ++  ++ +       REI +L+ +  G NIV+L DVV  +  K   L+FEY++  D K    +  D+      I+ ++Y++L+ + +CHS  ++HRD+KP N++ID     L+L D+GLA  F  P   +   V + +++ PE+L+  + Y
Sbjct:   32 DDYEVVRKVGRGKYSEVFEGINMNNNEKCIIKILKPVKKKK-----IRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD-----IRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDY 204          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CSK21_RABIT (Casein kinase II subunit alpha OS=Oryctolagus cuniculus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 58/184 (31.52%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH--SEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            D Y+ V K+G G Y  V++A N   NE + +K ++  ++ +       REI +L+ ++ G NI+ L D+V   + +   L FE+++  D K+   +  D+      I+ ++Y+IL+ + YCHS  ++HRD+KP N++ID     L+L D+GLA  F  P   +   V + +++ PE+L+  + Y
Sbjct:   37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPNIITLADIVKDPASRTPALAFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMY 209          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19
Identity = 56/155 (36.13%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKT----FLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            M++YE    +G+GT+G V+ ARN  +N+++A+K +  +Q  + G+     REI+ ++ + H NIV+L +V+ +  K+Y V EY+     K  +     A   +L +     +  Q++  + YCHS  V HRDLKP+NLL+D   N LK++DFGL+
Sbjct:    9 MERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQILKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYV-----KGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENEN-LKVSDFGLS 157          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19
Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            Y+ V+ +GEG++G V  A +  T + +ALK I    L + D  +     REIS L+ ++H +I++L DV+ S+ ++ +V EY   +L  ++      +      + F  QI+  + YCH H+++HRDLKP+NLL+D   N +K+ADFGL+
Sbjct:   55 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLS 199          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19
Identity = 52/149 (34.90%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            +Y+ ++ +GEG++G V  A++  T + +ALK I R       +     REIS L+ ++H +I++L DV+ S+ ++ +V E+   +L  ++        D    + F  QI+  + YCH H+++HRDLKP+NLL+D + N +K+ADFGL+
Sbjct:   52 RYQILKTLGEGSFGKVKLAQHLGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFAGKELFDYIVQRGKMPEDEA--RRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLN-VKIADFGLS 197          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19
Identity = 62/183 (33.88%), Postives = 98/183 (53.55%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLG 751
            + +Y+ +  IG G  G+V  A +      +A+KK+    +++     A RE+ L+K + H NI+ L +V   +K L      YLV E +D +L + +        D   +   LYQ+L G  + HS  ++HRDLKP N+++ +    LK+ DFGLAR     +   T  VVT +YRAPE++LG
Sbjct:   23 LKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERLSYLLYQMLCGTKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG 199          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            Y+ V+ +GEG++G V  A +  T + +ALK I    L + D  +     REIS L+ ++H +I++L DV+ S+ ++ +V EY   +L  ++      +      + F  QI+  + YCH H+++HRDLKP+NLL+D   N +K+ADFGL+
Sbjct:   39 YQIVKTLGEGSFGKVKLAYHVTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRNKMSEQEA--RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN-VKIADFGLS 183          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: STK6_RAT (Serine/threonine-protein kinase 6 OS=Rattus norvegicus GN=Aurka PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 58/182 (31.87%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRH 760
            ++ ++    +G+G +G VY AR   +   +ALK + +++ E  GV     RE+ +   ++H NI+RL    H   ++YL+ EY  L  + + +     F  D +   T++ ++   ++YCHS RV+HRD+KP+NLL+      LK+ADFG   +   P    T    TL Y+ PE++ G  H
Sbjct:  123 LEDFDIGRPLGKGKFGNVYLAREKQSKFILALKVLFKVQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGW--SVHAPSSRRTTLCGTLDYQPPEMIEGRMH 299          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 60/180 (33.33%), Postives = 95/180 (52.78%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGL-ARAFGIPVXTFTHEVV-TLWYRAPEILL 748
            M +Y+    +G GT+  VYKA    T E +A+K    E  +  G      RE+ +++ + H +++RL +V+ +  ++Y V EY    +L   +   P F     + + +  Q++  + +CHS  V HRDLKP+NLL+D R + LK+ DFGL A   G+      H    T  Y APE+LL
Sbjct:   14 MGRYKLGRLLGRGTFAKVYKAYKLATGEAVAIKVFDKEAVQRSGTVEQVKREVDVMRRVHHRHVIRLHEVMATRSRIYFVMEYASGGELFTRLSRSPRFPEP--VARRYFQQLITAVEFCHSRGVYHRDLKPENLLLDARGD-LKVTDFGLSALDGGLRGDGLLHTTCGTPAYVAPEVLL 190          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 56/152 (36.84%), Postives = 93/152 (61.18%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYL---DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 670
            +YE  + +G+GT+  VY  RN VT++++A+K I  ++  + G+     REIS++K ++H NIV+L +V+ ++ K+Y V EY+   +L  K       + A      + +  Q++  + +CHS  V HRDLKP+NLL+D   N LK+ DFGL+
Sbjct:   14 RYEIGKLLGQGTFAKVYHGRNIVTSQSVAIKVIDKDKIFKVGLMDQIKREISVMKLVRHPNIVQLYEVMATKSKIYFVLEYVKGGELFNKVAKGRLKEDA-----ARKYFQQLVSAVDFCHSRGVYHRDLKPENLLVDENGN-LKITDFGLS 159          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK22_ARATH1.521e-1932.61Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK21_RABIT1.521e-1931.52Casein kinase II subunit alpha OS=Oryctolagus cuni... [more]
CIPKF_ORYSJ1.521e-1936.13CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
SNF1_YEAST1.987e-1936.00Carbon catabolite-derepressing protein kinase OS=S... [more]
SNF1_CANAL1.987e-1934.90Carbon catabolite-derepressing protein kinase OS=C... [more]
MK08B_CYPCA1.987e-1933.88Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
SNF1_CANGA2.595e-1936.00Carbon catabolite-derepressing protein kinase OS=C... [more]
STK6_RAT3.389e-1931.87Serine/threonine-protein kinase 6 OS=Rattus norveg... [more]
CIPKU_ORYSJ3.389e-1933.33CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPKI_ORYSJ3.389e-1936.84CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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