CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.776e-60
Identity = 115/182 (63.19%), Postives = 148/182 (81.32%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M +YEK+EKIGEGTYG V+K RN  T E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HSEKKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV  ++ EVVTLWYR P++L G++ Y+
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKGRNRETLEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL-NGDIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYT 180          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.168e-60
Identity = 117/181 (64.64%), Postives = 147/181 (81.22%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            Q++++EK+GEGTY  VYK RN  T + +ALK+I L+ E EG PSTAIREISL+KE++H NIV L DV+H+E KL LVFEY+D DLKK MD+  +  A + + +K F+YQ+LRGI +CH +RVLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV TF++EVVTLWYRAP++LLGSR YS
Sbjct:    6 QFQQLEKLGEGTYATVYKGRNRTTGQLVALKEINLDSE-EGTPSTAIREISLMKELKHENIVTLYDVIHTENKLNLVFEYMDKDLKKFMDTNGNKGALETKQVKWFMYQLLRGILFCHDNRVLHRDLKPQNLLINAK-GQLKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYS 184          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.151e-59
Identity = 113/182 (62.09%), Postives = 148/182 (81.32%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M +Y+K+EKIGEGTYG V+K RN  T E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VLHRDLKPQNLLI+ +   LKLADFGLARAFGIPV  ++ EVVTLWYR P++L G++ Y+
Sbjct:    1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKKLTLVFEHCDQDLKKYFDSL-NGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYT 180          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.504e-59
Identity = 110/183 (60.11%), Postives = 143/183 (78.14%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-RLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            ++ + K+EKIGEGTYGVVYK +N  TN  +A+KKIRLE EDEGVPSTA+REISLLKE+QH N+V L+ V+  E +L+L+FE+L  DLK++MD        P   +K++ +QIL+ + +CH  RV+HRDLKPQNLL+D    A+KLADFGLARA GIP+  +THEVVTLWYRAPEIL+G++ YS
Sbjct:   19 LNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFLIFEFLSFDLKRYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVD-NNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYS 200          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.746e-59
Identity = 111/179 (62.01%), Postives = 140/179 (78.21%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            +Y+++EKIGEG+YGVVY+AR+  T+  +ALK+IRLE  +EGVP TAIREIS+LKE++H NIVRL DV HSE +L LVFEY+++DLKK+MD       DP  I+ F+  +L+G+ +CH   VLHRDLKP NLLI R    LKLADFGL RAFGIPV  +THEVVTLWYR+P++LLGS  Y
Sbjct:    4 RYQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENRLNLVFEYMEMDLKKYMDRASGNL-DPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISRE-KELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQY 180          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.171e-58
Identity = 115/179 (64.25%), Postives = 139/179 (77.65%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            +YE+ EKIGEGTYGVVYKAR+  T  T+ALK+IRL+ E+EGVP TAIREISLLKE++H NIV+L DV HSE +L +VFEYLDLDLKK++D   +   D   I+ F+  +LRG+A+CH   VLHRDLKPQNLLI R    LKL DFGL R+F IPV  FT+EVVTLWYR P++LLGS  Y
Sbjct:    4 RYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDR-ENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISRE-KELKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQY 180          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 2.171e-58
Identity = 113/182 (62.09%), Postives = 141/182 (77.47%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS 367          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.836e-58
Identity = 113/182 (62.09%), Postives = 140/182 (76.92%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C    +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ R   LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS 367          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.837e-58
Identity = 112/181 (61.88%), Postives = 144/181 (79.56%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMD-SCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            Q++++EK+GEGTY  VYK RN  T   +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFEY+D DLKK+M+      A D +++K+F++Q+L+GI +CH +RVLHRDLKPQNLLI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+
Sbjct:    7 QFQQLEKLGEGTYATVYKGRNRATGALVALKEISLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEYMDKDLKKYMEVHGQQSALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYT 185          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.837e-58
Identity = 112/182 (61.54%), Postives = 141/182 (77.47%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ Y K+EK+GEGTY  VYK R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VLHRDLKPQNLLI+ +   LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEK-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS 367          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK5_GLOMM1.776e-6063.19Cell division protein kinase 5 homolog OS=Glossina... [more]
PHO85_YARLI5.168e-6064.64Negative regulator of the PHO system OS=Yarrowia l... [more]
CDK5_DROME1.151e-5962.09Cell division protein kinase 5 homolog OS=Drosophi... [more]
CDC2_CAEEL1.504e-5960.11Cell division control protein 2 homolog OS=Caenorh... [more]
CC2H1_TRYCO9.746e-5962.01Cell division control protein 2 homolog 1 OS=Trypa... [more]
CRK1_LEIME2.171e-5864.25Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CDK17_MOUSE2.171e-5862.09Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK17_RAT2.836e-5862.09Cell division protein kinase 17 OS=Rattus norvegic... [more]
PHO85_CANAL4.837e-5861.88Negative regulator of the PHO system OS=Candida al... [more]
CDK17_HUMAN4.837e-5861.54Cell division protein kinase 17 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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