CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.009e-55
Identity = 104/182 (57.14%), Postives = 141/182 (77.47%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+++ L LVFEYLD DLK+++D C +  N    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  118 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMN-MHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYS 296          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.317e-55
Identity = 101/184 (54.89%), Postives = 143/184 (77.72%), Query Frame = 2
Query:  215 D*MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            D  D+Y +++ +GEGTYGVVY+A +  T + +ALKK+RL++ DEG+P TA+RE+S+L+E+ H NIV L DV+ ++ KLYL+FEY+D DLKK ++     A     +K  +YQ+L G+++CH HR++HRDLKP N+L+    N++K+ADFGLARAF IP+ T+THEVVTLWYRAPEILLG +HY+
Sbjct:   18 DQFDRYNRMDILGEGTYGVVYRAVDRATGQIVALKKVRLDRTDEGIPQTALREVSILQEIHHPNIVNLLDVICADGKLYLIFEYVDHDLKKALEK-RGGAFTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILV-TTDNSVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYT 199          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.247e-55
Identity = 108/192 (56.25%), Postives = 143/192 (74.48%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK----LYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M++YEK+EK+GEGTYG VYKA++  T + +ALKK RLE ++EG+P TA+REIS+L+ +     +VRL  V  + K     LYLVFE+LD DLKK +D+     N PR     +IK+FLYQ+ +G+A+CH H VLHRDLKPQNLL+D+    LK+AD GL RAF +P+ ++THE+VTLWYRAPE+LLGS HYS
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQATKNGKPVLYLVFEFLDTDLKKFVDAYRKGPN-PRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYS 191          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.935e-55
Identity = 110/184 (59.78%), Postives = 143/184 (77.72%), Query Frame = 2
Query:  227 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            +++++E++G GTY  VYK  N  T   +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK MDS  D    PR     L+K F +Q+L+G+A+CH +R+LHRDLKPQNLLI+ +   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR Y
Sbjct:    8 RFKQLERLGNGTYATVYKGLNKTTGLYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKFMDSRLD-REMPRGLELSLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNK-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 188          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.538e-55
Identity = 103/182 (56.59%), Postives = 140/182 (76.92%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK ++H NIV L D++H+++ L LVFEYLD DLK+++D C +  +    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  139 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMS-MHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYS 317          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 6.538e-55
Identity = 103/182 (56.59%), Postives = 140/182 (76.92%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            ++ Y K++K+GEGTY  V+K R+ +T   +ALK+IRLE E EG P TAIRE+SLLK ++H NIV L D++H+++ L LVFEYLD DLK+++D C +  +    +K F++Q+LRG+AYCH  ++LHRDLKPQNLLI+ R   LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  139 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMS-MHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYS 317          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.538e-55
Identity = 101/182 (55.49%), Postives = 136/182 (74.73%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN--DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            + ++K+EKIGEGTYGVVYKAR   TN  +ALKKIRLE E+EG+P+T IREI LLK ++H  IV L DV+++  K+YLVFEY++LDL++++D   D     +   ++    Q+L  + YCHS  + HRDLKPQN+L+D + N +KLADFGL RA GIP+ T+T EVVTLWYR PE+LLG ++Y
Sbjct:    3 ESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHSTIVELSDVIYNNNKMYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKEN-IKLADFGLGRAAGIPLRTYTTEVVTLWYRPPELLLGCKYY 183          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.456e-54
Identity = 110/199 (55.28%), Postives = 142/199 (71.36%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRL-----------QDVVHSEKK-LYLVFEYLDLDLKKHMDSCPDFAN----DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M++YEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EG+P TA+REISLL+ +     IVRL             V HS K  LYLVFEYLD DLKK +DS    +N    +  L++ F++Q+ +G+A+CHSH VLHRDLKPQNLL+D+    LK+AD GL+RAF +P+  +THE+VTLWYRAPE+LLGS HYS
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDSTVSHSPKSNLYLVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYS 199          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53
Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH------SEKKLYLVFEYLDLDLKKHMDSCPDFAND----PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M++YEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EGVP TA+RE+SLL+ +     +VRL  V H       +  LYLVFEYLD DLKK +DS     N     P+ I++FL+Q+ +G+++CH+H VLHRDLKPQNLL+D+    LK+AD GLARAF +P+ ++THE+VTL YRAPE+LLGS HYS
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKALEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLSVEHVDCAKNGKPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYS 193          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.685e-53
Identity = 103/190 (54.21%), Postives = 138/190 (72.63%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFANDPRL--IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD YEK+EK+GEGTYG VYKAR   T   +ALKK RL ++DEGVP TA+RE+SLL+ + Q  ++VRL D+   + K     LYLVFEY+D DLKK + +         +  +K  +YQ+ +G+A+CH   VLHRDLKP NLL+DR+T ALK+AD GL+R+F +P+  +THE++TLWYRAPE+LLG+ HYS
Sbjct:   25 MDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYS 214          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK18_MOUSE1.009e-5557.14Cell division protein kinase 18 OS=Mus musculus GN... [more]
CC2H3_TRYBB1.317e-5554.89Cell division control protein 2 homolog 3 OS=Trypa... [more]
CKB11_ORYSJ2.247e-5556.25Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
PHO85_ASHGO2.935e-5559.78Negative regulator of the PHO system OS=Ashbya gos... [more]
CDK18_PONAB6.538e-5556.59Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN6.538e-5556.59Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDC28_ENCCU8.538e-5555.49Probable cell division control protein 28 homolog ... [more]
CKB12_ARATH1.456e-5455.28Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDC2C_ANTMA1.233e-5355.44Cell division control protein 2 homolog C OS=Antir... [more]
CKB21_ORYSJ4.685e-5354.21Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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