CF835954

Overview
NameCF835954
Unique NameCF835954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.685e-53
Identity = 107/197 (54.31%), Postives = 140/197 (71.07%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH----------SEKKLYLVFEYLDLDLKKHMDSCPDFAN----DPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M++YEK+EK+GEGTYG VYKA    T + +ALKK RLE ++EG+P TA+REISLL+ +     +VRL  V H          ++  LYLVFEYLD DLKK +DS     N    +P LI+  ++Q+ +G+A+CHSH VLHRDLKPQNLL+ +    LK+AD GL RAF +P+ ++THE+VTLWYRAPE+LLGS HYS
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKGTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSTSIYVVRLLCVEHVHQPSTKSQSTKSNLYLVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYS 197          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.992e-53
Identity = 100/190 (52.63%), Postives = 137/190 (72.11%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD + K+EK+GEGTYG VY+A    T + +ALKK RL +++EGVP T +RE+SLL+ +    ++VRL DV   + K     LYLVFEY+D DLKK++ S         P  +K+ +YQ+ +G+A+CH H VLHRDLKP NLL+DR+T  LK+AD GLARA+ +P+  +THE++TLWYRAPE+LLG+ HYS
Sbjct:   11 MDAFVKLEKVGEGTYGKVYRAMEKSTGKIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFKQTGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYS 200          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.780e-52
Identity = 101/190 (53.16%), Postives = 138/190 (72.63%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKK-----LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            MD +EK+EK+GEGTYG VY+AR   T + +ALKK RL +++EGVPST +REIS+L+ +    ++VRL DV     K     LYLVFEY+D D+KK + S      +   + IK+ +YQ+ +G+A+CH H +LHRDLKP NLL+D +T  LK+AD GLARAF +P+  +THE++TLWYRAPE+LLG+ HYS
Sbjct:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVKQGLSKEGKTVLYLVFEYMDTDVKKFIRSFRSTGKNIPTQTIKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYS 200          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.966e-52
Identity = 103/190 (54.21%), Postives = 138/190 (72.63%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDV---VHSEKK--LYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            M+ +EK+EK+GEGTYG VY+AR   T   +ALKK RL +++EGVP T +REIS+L+ +    +IVRL DV   ++ E K  LYLVFEY+D DLKK + S      +     +K  +YQ+ +G+A+CH H VLHRDLKP NLL+DR+T  LK+AD GLARAF +P+  +THE++TLWYRAPE+LLG+ HYS
Sbjct:   13 MEAFEKLEKVGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQNIPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYS 202          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK14_HUMAN (Cell division protein kinase 14 OS=Homo sapiens GN=CDK14 PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 5.727e-51
Identity = 103/181 (56.91%), Postives = 134/181 (74.03%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            D YEK+EK+GEG+Y  VYK ++ V  + +ALK IRL QE+EG P TAIRE SLLK ++H NIV L D++H+++ L LVFEY+  DL ++MD  P   + P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  133 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLH-PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYS 310          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.666e-50
Identity = 102/181 (56.35%), Postives = 134/181 (74.03%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            D YEK+EK+GEG+Y  VYK ++ V  + +ALK IRL QE+EG P TAIRE SLLK ++H NIV L D++H+++ L LVFEY+  DL ++M+  P   + P  +K FL+Q+LRG++Y H   +LHRDLKPQNLLI   T  LKLADFGLARA  +P  T+++EVVTLWYR P++LLGS  YS
Sbjct:  133 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMEQHPGGLH-PDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYS 310          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CC2H2_TRYBB (Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.001e-49
Identity = 92/180 (51.11%), Postives = 131/180 (72.78%), Query Frame = 2
Query:  224 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            D+Y ++EK+GEG+YG+VYK  +  T  T+A+K+I L   D GVPSTA+RE+SLL+E+ H  +VRL DVV  E KL L+FEY++ DL+  +    + A     ++  ++Q+L G+  CHS R +HRD+KP N+LIDR+ + +KLADFGL RAF +P+ T+T EV+TLWYRAPE+LLG + Y
Sbjct:   44 DRYSRIEKVGEGSYGIVYKCHDNFTGRTVAMKRIPLIVNDGGVPSTAVREVSLLRELNHPYVVRLLDVVLHEAKLLLIFEYMEQDLQGMLKQ-RNTAFVGGKLRRIMFQLLLGLHECHSRRFVHRDIKPSNILIDRKESVVKLADFGLGRAFRVPLQTYTTEVMTLWYRAPEVLLGDKQY 222          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.247e-46
Identity = 95/182 (52.20%), Postives = 131/182 (71.98%), Query Frame = 2
Query:  221 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-ANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHY 763
            M +YEK +++GEGTYGVV KA + V N  +ALKKI+ E+ED+G+P T++REI++L E++H N+V L D+   +K LYLVFE+ D DL + M        N+ R I   +YQIL+G+A+CH H++LHRD+KPQN+LI+ +   +KL +FGLAR   I    +T EVVTLWYRAPEILLG+  Y
Sbjct:    1 MTRYEKKQQLGEGTYGVVCKAWDTVCNRYVALKKIKQEREDDGIPVTSVREIAVLLELKHPNVVDLYDIYLEDKFLYLVFEFCDEDLYQFMSRSSKIPINETRSI---VYQILQGLAFCHYHQILHRDMKPQNILIN-KNGTIKLGEFGLARLTTINDRKYTSEVVTLWYRAPEILLGATQY 178          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 4.696e-45
Identity = 95/179 (53.07%), Postives = 124/179 (69.27%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            Y  +EK+GEG+Y  VYK  + +  + +ALK I +  E EGVP TAIRE SLLK ++H NIV L D+VH+++ L  VFEY+  DL ++M   P   + P  ++ F++Q+LRG+AY H  RVLHRDLKPQNLL+      LKLADFGLARA  IP  T++ EVVTLWYR P+ LLG+  YS
Sbjct:  101 YLNLEKLGEGSYAKVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGLKHANIVLLHDIVHTKETLTFVFEYMHTDLAQYMSQHPGGLH-PHNVRLFMFQLLRGLAYIHHQRVLHRDLKPQNLLLS-HLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYS 276          
BLAST of CF835954 vs. ExPASy Swiss-Prot
Match: CDK15_HUMAN (Cell division protein kinase 15 OS=Homo sapiens GN=CDK15 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.010e-45
Identity = 94/179 (52.51%), Postives = 123/179 (68.72%), Query Frame = 2
Query:  230 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVXTFTHEVVTLWYRAPEILLGSRHYS 766
            Y  +EK+GEG+Y  VYK  + +  + +ALK I +  E EGVP TAIRE SLLK ++H NIV L D++H+++ L  VFEY+  DL ++M   P   + P  ++ F++Q+LRG+AY H   VLHRDLKPQNLLI      LKLADFGLARA  IP  T++ EVVTLWYR P+ LLG+  YS
Sbjct:   52 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMSQHPGGLH-PHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLIS-HLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGATEYS 227          
The following BLAST results are available for this feature:
BLAST of CF835954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB11_ARATH4.685e-5354.31Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA7.992e-5352.63Cell division control protein 2 homolog D OS=Antir... [more]
CKB21_ARATH1.780e-5253.16Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CKB22_ARATH3.966e-5254.21Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDK14_HUMAN5.727e-5156.91Cell division protein kinase 14 OS=Homo sapiens GN... [more]
CDK14_MOUSE1.666e-5056.35Cell division protein kinase 14 OS=Mus musculus GN... [more]
CC2H2_TRYBB7.001e-4951.11Cell division control protein 2 homolog 2 OS=Trypa... [more]
CDK2_ENTHI4.247e-4652.20Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK15_MOUSE4.696e-4553.07Cell division protein kinase 15 OS=Mus musculus GN... [more]
CDK15_HUMAN8.010e-4552.51Cell division protein kinase 15 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835954 ID=CF835954; Name=CF835954; organism=Citrus sinensis; type=EST; length=768bp
CTCCAATCACCTCATTCTTACTCCGGCGATCTCCCCCGTCGGCTTGGATC
GTCCTCGCGTCTGTCACTGTATTATGCATTTGTATTTTTCTCTTTCGTAA
GCGGTTAATTTTCTCTTCATAACACACTGCCGCCACCTACGCCGTCGATT
CGTGCCGTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGT
AGCTGTTACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATT
GGTGAAGGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAA
TGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTG
TGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCAT
GGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTA
TCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTT
GCCCAGATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAA
ATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGA
TTTGAAACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTANGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTAC
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