CF835955

Overview
NameCF835955
Unique NameCF835955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.421e-55
Identity = 99/147 (67.35%), Postives = 123/147 (83.67%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            LADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+LF+IFR LGTP+E  WPGVTS+PD+K +FPKW  ++   VV  L+  G  LL +ML  DP++RI+A++AL H +F+DV
Sbjct:  143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.421e-55
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+K+ FPKW    L ++V+NL+  G+DLL KML  +P +RI+AR A+ H YF D++
Sbjct:  144 LADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKGGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.421e-55
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+K+ FPKW    L ++V+NL+  G+DLL KML  +P +RI+AR A+ H YF D++
Sbjct:  144 LADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWKEGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.421e-55
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGL+RAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+KS FPKW    L ++V+NL+  G+DLL KML  +P +RI+AR A+ H YF D++
Sbjct:  144 LADFGLSRAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKSTFPKWKGGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.856e-55
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFG+PVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SLPD+K+ FPKW    L ++V+NL+  G+DLL KML  +P +RI+AR A+ H YF D++
Sbjct:  144 LADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWMEGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.856e-55
Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = -2
Query:  255 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFR 689
            LADFGLARAFG+P+RT+THEVVTLWYRAPEILLG R YST VD+WSVG IFAEM  ++PLFPGDSEIDE+FKIF++LGTP+E+TWPGVTS PDFK++FPKW  ++   +V  LE  G+DLL  ML  DP+RRI+A+ A  H YF+
Sbjct:  164 LADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGGRQYSTGVDMWSVGAIFAEMCTRKPLFPGDSEIDEIFKIFKLLGTPDENTWPGVTSFPDFKASFPKWKREDTRKLVPGLERNGLDLLDAMLEYDPARRISAKQACMHPYFQ 308          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 2.424e-55
Identity = 100/147 (68.03%), Postives = 122/147 (82.99%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            LADFGLARAFG+PVRTFTHEVVTLWYRAPEILLG + YST VD+WS+GCIFAEM+ +R LFPGDSEID+LF+IFR LGTP+E +WPGVT++PD+KS FPKW  ++   VV  L+  G DLL +ML  D ++RI+A+ AL H +FRDV
Sbjct:  143 LADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMITRRALFPGDSEIDQLFRIFRTLGTPDEVSWPGVTTMPDYKSTFPKWIRQDFSKVVPPLDEDGRDLLAQMLQYDSNKRISAKVALTHPFFRDV 289          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIPVR +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN D WP V SL D+K+ FPKW    LGT V+NL+  G+DLL KML  DP++RI+ + AL H YF D++
Sbjct:  144 LADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNDVWPDVESLQDYKNTFPKWKPGSLGTHVQNLDEDGLDLLSKMLIYDPAKRISGKMALNHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.571e-54
Identity = 95/146 (65.07%), Postives = 117/146 (80.14%), Query Frame = -2
Query:  252 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRD 689
            L DFGLARAFG+P+R +THE+VTLWYRAPE+LLG + YST VD WS+GCIFAEM N++P+F GDSEID++FKIFRVLGTPNE  WP +  LPDFK +FP+W  K+L  VV +L+P GIDLL K+L  DP  RI+AR A  H YF++
Sbjct:  152 LGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQE 297          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.052e-54
Identity = 98/145 (67.59%), Postives = 117/145 (80.69%), Query Frame = -2
Query:  255 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFR 689
            LADFGLARAFG+P+RT+THEVVTLWYR+PEILLG R YST VD+WS G IFAEM  ++PLFPGDSEIDE+FKIFR+LGTP+E  WPGVTS PDFK  FPKW  +++  VV  LE  G+DLL  +L  DP+RRI+A+ A  H YF+
Sbjct:  163 LADFGLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYSTGVDMWSCGAIFAEMCTRKPLFPGDSEIDEIFKIFRILGTPDETIWPGVTSFPDFKPTFPKWKREDIQNVVPGLEEDGLDLLEALLEYDPARRISAKQACMHPYFQ 307          
The following BLAST results are available for this feature:
BLAST of CF835955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK2_BOVIN1.421e-5567.35Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDC2_ORYLU1.421e-5566.22Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA1.421e-5566.22Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYCU1.421e-5566.22Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA1.856e-5566.22Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_AJECA1.856e-5568.97Cell division control protein 2 OS=Ajellomyces cap... [more]
CDK2_XENLA2.424e-5568.03Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDC2_CHICK4.135e-5566.22Cell division control protein 2 homolog OS=Gallus ... [more]
CDC28_YEAST1.571e-5465.07Cell division control protein 28 OS=Saccharomyces ... [more]
CDC2_EMENI2.052e-5467.59Cell division control protein 2 OS=Emericella nidu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835955 ID=CF835955; Name=CF835955; organism=Citrus sinensis; type=EST; length=690bp
TACATATCTCCTATTAAAAGAAAAACTGGCACAAACATTTATCCACCAGA
TCTAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATGA
CTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTA
AAGACAGTCGGCAAATTTCGCAAACAATCAAAACCGAAGGCTTCACAATA
ATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCGA
CGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTG
CTTGGATCCATGCAGAGCATTTTAAAAAGGAGATCAATGCCAGCTGGCTC
AAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGG
CAGATTTAAAGTCAGGCAATGAAGTCACTCCAGGCCATGTGTCCTCATTA
GGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGTC
TCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCCA
CCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATATT
TCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAAC
AGGAATACCAAAAGCCCTGGCCAGTCCAAAATCTGCTAGC
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