CF835955

Overview
NameCF835955
Unique NameCF835955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.052e-54
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIPVR +THEVVTLWYRAPE+LLGS  YSTPVDVWS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K++FPKW    L   V+N++  G+DLL KML  DP++RI+AR AL H YF D++
Sbjct:  144 LADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.680e-54
Identity = 95/148 (64.19%), Postives = 118/148 (79.73%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+KS FPKW    L + V+NL+  G+DLL KML  DP++RI+ + AL H YF D++
Sbjct:  144 LADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKSTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.971e-54
Identity = 94/148 (63.51%), Postives = 118/148 (79.73%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLL KML  DP++RI+ + AL H YF D++
Sbjct:  144 LADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 7.799e-54
Identity = 92/148 (62.16%), Postives = 122/148 (82.43%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIPVRT++HEVVTLWYRAP++L+GSR YSTP+D+WS GCIFAEM + RPLFPG    D+LF+IF++LGTPNE++WP +T LP++K+ FP  P+ +L ++V  L+  G++LL KML  DP++RITA +AL+H YF  +E
Sbjct:  142 LADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESWPSITELPEYKTDFPVHPAHQLSSIVHGLDEKGLNLLSKMLQYDPNQRITAAAALKHPYFDGLE 289          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.799e-54
Identity = 94/148 (63.51%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLL KML  DP++RI+ + AL+H YF D++
Sbjct:  144 LADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 7.799e-54
Identity = 94/148 (63.51%), Postives = 119/148 (80.41%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIP+R +THEVVTLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLL KML  DP++RI+ + AL+H YF D++
Sbjct:  144 LADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.019e-53
Identity = 93/144 (64.58%), Postives = 116/144 (80.56%), Query Frame = -2
Query:  258 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYF 689
            +ADFGL R+FGIPVR +THE+VTLWYRAPE+LLGS  YS PVD+WS+GCIFAEM  ++PLF GDSEID+LF++FR+L TP ED WPGVTSLPD+K+ FP W + +L   ++NL+  GIDL+ KML  DP  RI+A+  LEH YF
Sbjct:  144 VADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYF 287          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53
Identity = 98/144 (68.06%), Postives = 121/144 (84.03%), Query Frame = -2
Query:  258 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYF 689
            LADFGLARAFG+P+RT+THEVVTLWYRAPEILLGS+ YST VD+ S+GCIFAEMV  + LFPGDSEID+LF+IFR LGTP+E TWPGV+ +PD++S+FPKW  K L  +V +L P G DLL ++L  DPS+RI+A++AL H YF
Sbjct:  143 LADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYSTAVDI-SIGCIFAEMVTGKALFPGDSEIDQLFRIFRTLGTPSEATWPGVSQMPDYQSSFPKWSRKGLEEIVPSLGPEGKDLLLRLLQYDPSQRISAKTALAHPYF 285          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53
Identity = 92/148 (62.16%), Postives = 117/148 (79.05%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIP+R +THE +TLWYR+PE+LLGS  YSTPVD+WS+G IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLL KML  DP++RI+ + AL H YF D++
Sbjct:  144 LADFGLARAFGIPIRVYTHEAITLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53
Identity = 97/148 (65.54%), Postives = 118/148 (79.73%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARAFGIPVR +THEVVTLWYRA E+LLGS  YSTPVDVWSVG IFAE+  ++PLF GDSEID+LF+IFR LGTPN + WP V SL D+K+ FPKW    L + V+N++  G+DLL KML  DP++RI+AR A+ H YF D++
Sbjct:  144 LADFGLARAFGIPVRVYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLFHGDSEIDQLFRIFRSLGTPNNEVWPEVESLQDYKNTFPKWKGGSLSSNVKNIDEDGLDLLSKMLVYDPAKRISARKAMLHPYFDDLD 291          
The following BLAST results are available for this feature:
BLAST of CF835955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2A_XENLA2.052e-5466.22Cell division control protein 2-A OS=Xenopus laevi... [more]
CDC2_BOVIN2.680e-5464.19Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2_PONAB5.971e-5463.51Cell division control protein 2 homolog OS=Pongo a... [more]
CDK5_DICDI7.799e-5462.16Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDC2_RAT7.799e-5463.51Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_MOUSE7.799e-5463.51Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2_DROME1.019e-5364.58Cell division control protein 2 homolog OS=Drosoph... [more]
CDK3_MOUSE2.269e-5368.06Cell division protein kinase 3 OS=Mus musculus GN=... [more]
CDC2_HUMAN2.269e-5362.16Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2B_XENLA3.871e-5365.54Cell division control protein 2-B OS=Xenopus laevi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835955 ID=CF835955; Name=CF835955; organism=Citrus sinensis; type=EST; length=690bp
TACATATCTCCTATTAAAAGAAAAACTGGCACAAACATTTATCCACCAGA
TCTAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATGA
CTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTA
AAGACAGTCGGCAAATTTCGCAAACAATCAAAACCGAAGGCTTCACAATA
ATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCGA
CGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTG
CTTGGATCCATGCAGAGCATTTTAAAAAGGAGATCAATGCCAGCTGGCTC
AAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGG
CAGATTTAAAGTCAGGCAATGAAGTCACTCCAGGCCATGTGTCCTCATTA
GGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGTC
TCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCCA
CCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATATT
TCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAAC
AGGAATACCAAAAGCCCTGGCCAGTCCAAAATCTGCTAGC
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