CF835955

Overview
NameCF835955
Unique NameCF835955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.509e-46
Identity = 81/147 (55.10%), Postives = 115/147 (78.23%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            +AD GLARAF +P++ +THE++TLWYRAPE+LLG+ HYST VD+WSVGCIFAE+V  + +F GDSE+ +L  IF++ GTPNE+ WPGV++L ++   +P+W    L + V NL+ AG+DLL KML  +P++RI+A+ A+EH YF D+
Sbjct:  162 IADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMWPGVSTLKNWHE-YPQWKPSTLSSAVPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDL 307          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.509e-46
Identity = 91/155 (58.71%), Postives = 110/155 (70.97%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKEL-------GTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            LADFGLARA GIP+R +THEVVTLWYRAPEIL+G++ YS  VD+WS+GCIFAEM  ++PLF GDSEIDELF+IFRVLGTP E  W GV SLPD+K+ FPKW    L        T    L+     LL  +L  DPS R+ A+ AL H YF +++
Sbjct:  162 LADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKKTGKHLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYFDNMD 316          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.583e-46
Identity = 80/148 (54.05%), Postives = 117/148 (79.05%), Query Frame = -2
Query:  246 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVE 689
            +AD GLARA+ +P++ +THE++TLWYRAPE+LLG+ HYS  VD+WSV CIFAE+V Q+ LFPGDSE+ +L  IFR+LGTPNE+ WPGV++L D+   +P+W ++ + + V  L+  G++LL +ML  +PSRRI+A+ A+EH YF +++
Sbjct:  162 IADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELVTQKALFPGDSELQQLLHIFRLLGTPNEEIWPGVSTLVDWHE-YPQWTAQPISSAVPGLDEKGLNLLSEMLHYEPSRRISAKKAMEHPYFDELD 308          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CC2H2_TRYBB (Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46
Identity = 85/147 (57.82%), Postives = 109/147 (74.15%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            LADFGL RAF +P++T+T EV+TLWYRAPE+LLG + Y   VDVWS+GC+FAE+  +R LF GD+ I++LF IF++LGTP E TW GVTSLP     FP+W +K L T V  L+  G+DLL +MLC +P  RITA  AL+H YF +V
Sbjct:  185 LADFGLGRAFRVPLQTYTTEVMTLWYRAPEVLLGDKQYLPAVDVWSMGCVFAELARRRSLFAGDTAINQLFSIFQLLGTPTEATWRGVTSLPHHNVNFPRWTAKPLRTAVPALDDDGVDLLRRMLCYNPRERITAYEALQHSYFDEV 331          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.817e-46
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = -2
Query:  252 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRD 689
            LADFGLARAFGIPV TF++EVVTLWYRAP++LLGSR YST +D+WS GCI AEM   RPLFPG S  D+L  IF+++GTPNE TWP ++SLP+++S F  +  ++L  ++  ++   +DLL  +L + P  RITAR +LEH +F +
Sbjct:  146 LADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSAGCIMAEMFTGRPLFPGSSNDDQLQHIFKLMGTPNESTWPNISSLPNYRSNFQVYAPQDLRVIIPQIDNVALDLLLSLLQLKPENRITARQSLEHPWFAE 291          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.067e-45
Identity = 83/147 (56.46%), Postives = 111/147 (75.51%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            L DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+  +D+WS GCIFAEM   +PLFPG S  D+L KIFR++GTPNE TWPGV+S  +FK+ +  +  ++L  ++ NL+  G++LL  +L M P  RITAR AL+H +F ++
Sbjct:  147 LGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEMCTGKPLFPGTSNDDQLIKIFRLMGTPNERTWPGVSSYANFKNNWQIFVPQDLRLLIPNLDSMGLNLLSSLLQMRPDARITARQALQHPWFHEI 293          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 8.643e-45
Identity = 81/144 (56.25%), Postives = 108/144 (75.00%), Query Frame = -2
Query:  258 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYF 689
            LADFGLAR+ GIPV TF++EVVTLWYRAP++LLGSR YST +D+WSVGCI AEM   RPLF G +  D+L KIFR+LGTP E +WPG++ LP++K  FP + +++L  +    +P G+DLL +ML + P  R T + AL+H +F
Sbjct:  142 LADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKIFRLLGTPTEQSWPGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLDLLRRMLRLQPELRTTGQDALQHAWF 285          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.474e-44
Identity = 81/147 (55.10%), Postives = 111/147 (75.51%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            L DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+T +D+WS GCIFAEM   +PLFPG +  D+L KIFR++GTPNE TWPG++   ++K+ +  +  ++L  +V NL+  G++LL  +L M P  RITAR AL+H +F ++
Sbjct:  147 LGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKIFRLMGTPNERTWPGISQYTNYKNNWQIFVPQDLRLIVPNLDSMGLNLLQSLLQMRPESRITARQALQHPWFHEI 293          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.284e-44
Identity = 83/150 (55.33%), Postives = 106/150 (70.67%), Query Frame = -2
Query:  240 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDVEFV 689
            LADFGL RA GIP+RT+T EVVTLWYR PE+LLG ++Y   VDVWS  CI AE+V  RP FPGDSEID+LF+IF+VLGTPN   W  V + P++K  FP W   +L T+ R  +P  +DL+ KML  DP  R+TA++ L H+YF  +  +
Sbjct:  146 LADFGLGRAAGIPLRTYTTEVVTLWYRPPELLLGCKYYDASVDVWSAACIMAEVVLMRPFFPGDSEIDQLFRIFKVLGTPNNSRWSNVENFPNYKVEFPVWDPVDLKTIFRG-DPDFVDLISKMLEYDPKMRMTAKNGLSHKYFEGMPLI 294          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43
Identity = 83/144 (57.64%), Postives = 111/144 (77.08%), Query Frame = -2
Query:  258 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYF 689
            +AD GLARAF +P++++THE+VTL YRAPE+LLGS HYST VD+ SVGCIFAEMV ++ LFPGDSE  +L  IFR+LGTP+++ WPGV+SL D+   +P+W  +     V +L P G+DLL K L  DP+ RI+A++AL+H YF
Sbjct:  155 IADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPSDEQWPGVSSLRDW-HVYPQWEPQNSAPAVPSLGPDGLDLLTKTLKYDPADRISAKAALDHPYF 297          
The following BLAST results are available for this feature:
BLAST of CF835955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB21_ARATH3.509e-4655.10Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CDC2_CAEEL3.509e-4658.71Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2D_ANTMA4.583e-4654.05Cell division control protein 2 homolog D OS=Antir... [more]
CC2H2_TRYBB5.985e-4657.82Cell division control protein 2 homolog 2 OS=Trypa... [more]
PHO85_YARLI7.817e-4656.16Negative regulator of the PHO system OS=Yarrowia l... [more]
PHO85_DEBHA5.067e-4556.46Negative regulator of the PHO system OS=Debaryomyc... [more]
PEF1_SCHPO8.643e-4556.25Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
PHO85_CANAL1.474e-4455.10Negative regulator of the PHO system OS=Candida al... [more]
CDC28_ENCCU3.284e-4455.33Probable cell division control protein 28 homolog ... [more]
CDC2C_ANTMA2.780e-4357.64Cell division control protein 2 homolog C OS=Antir... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835955 ID=CF835955; Name=CF835955; organism=Citrus sinensis; type=EST; length=690bp
TACATATCTCCTATTAAAAGAAAAACTGGCACAAACATTTATCCACCAGA
TCTAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATGA
CTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTA
AAGACAGTCGGCAAATTTCGCAAACAATCAAAACCGAAGGCTTCACAATA
ATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCGA
CGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTG
CTTGGATCCATGCAGAGCATTTTAAAAAGGAGATCAATGCCAGCTGGCTC
AAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGG
CAGATTTAAAGTCAGGCAATGAAGTCACTCCAGGCCATGTGTCCTCATTA
GGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGTC
TCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCCA
CCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATATT
TCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAAC
AGGAATACCAAAAGCCCTGGCCAGTCCAAAATCTGCTAGC
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