CF835955

Overview
NameCF835955
Unique NameCF835955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cell division protein kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 3.517e-38
Identity = 78/151 (51.66%), Postives = 103/151 (68.21%), Query Frame = -2
Query:  252 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWP----SKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRD 689
            + DFGLAR +G P++ +T  VVT WYRAPE+LLG++ YST VD+WSVGCIF E++ Q+PLFPG+SEID++ K+F+ LGTP+E  WPG + LP  K   F + P     K  G +   L   G DL+ K L   P RRI+A   L+HEYFR+
Sbjct:  563 VGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGAL---LSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRE 710          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKEL----------GTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            + DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WSVGCI AE++ + PLF G +E ++L KIFR LGTPNE  WPG   LP  K  F K P   L          G  +  L  AG DLL  +L  DP +R++A +AL+HE+FR+V
Sbjct:  505 ICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPI--LSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREV 659          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKEL----------GTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            + DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WSVGCI AE++ + PLF G +E ++L KIFR LGTPNE  WPG   LP  K  F K P   L          G  +  L  AG DLL  +L  DP +R++A +AL+HE+FR+V
Sbjct:  505 ICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPI--LSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREV 659          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38
Identity = 75/151 (49.67%), Postives = 104/151 (68.87%), Query Frame = -2
Query:  252 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR--NLEPAG---IDLLFKMLCMDPSRRITARSALEHEYFRD 689
            L DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YST +D+WS GCI AEM+  +PLFPG ++ ++L  IF ++GTPNE  WP VT LP +     + P ++L  V++    EP     +D L  +L ++P  R++A+ AL H +F +
Sbjct:  149 LGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = -2
Query:  258 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYF 689
            LADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YST +D+W VGCIF EM   RPLFPG +  ++L  IFR+LGTP E+TWPG+ S  +FK+  +PK+ ++ L +    L+  G DLL K+L  +   RI+A  A++H +F
Sbjct:  302 LADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 446          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.337e-37
Identity = 79/154 (51.30%), Postives = 103/154 (66.88%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK------SAFPKWPSKELGT-VVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            + DFGLAR +G P++ +T  VVTLWYRAPE+LL S  YSTP+DVWSVGCIFAE +   PLFPG SEIDEL +IF+ LGTPNE  WPG T LP  K      S F ++P  +L           G+ LL  +L  DP +R++A +AL+H +F+++
Sbjct:  701 VGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKEL 854          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37
Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR--------NLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            + DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WS+GCI  E++++ PLF G SEID+L KIFR LGTP+E+ WPG + LP     F K     L    R         L  AG DLL ++L  DP +RI+A  AL HE+FR++
Sbjct:  489 ICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFREL 643          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37
Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = -2
Query:  249 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR--------NLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRDV 689
            + DFGL+R +G P++ +T  VVTLWYRAPE+LLG++ YST +D+WS+GCI  E++++ PLF G SEID+L KIFR LGTP+E+ WPG + LP     F K     L    R         L  AG DLL ++L  DP +RI+A  AL HE+FR++
Sbjct:  489 ICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFREL 643          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37
Identity = 77/151 (50.99%), Postives = 101/151 (66.89%), Query Frame = -2
Query:  252 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWP----SKELGTVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRD 689
            + DFGLAR +G P++ +T  VVTLWYRAPE+LLG++ YST  D+WSVGCIF E++ Q+PLFPG S+ID++ KIF+ +GTP+E  WPG + LP  K   F + P     K  G +   L   G DL+ K L   P RRI A   L+HEYFR+
Sbjct:  219 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDIGTPSEKIWPGYSELPAVKKMTFSELPYNNLRKRFGAL---LSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRE 366          
BLAST of CF835955 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.280e-37
Identity = 77/150 (51.33%), Postives = 102/150 (68.00%), Query Frame = -2
Query:  252 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELG---TVVRNLEPAGIDLLFKMLCMDPSRRITARSALEHEYFRD 689
            +ADFGLAR +G P++ FT  VVTLWYR+PE+LLG+R YSTPVD+WSVGCI AE +  +PLFPG  E++++ KIF  +GTP E  WPGVT L  +K+  F K+P  +L       R L   G  LL  +L +DP  R +A  AL+HE+F +
Sbjct:  500 IADFGLAREYGDPLKKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAEFILLKPLFPGRGELEQIKKIFMEMGTPTESIWPGVTELDGWKALTFEKYPYNQLRKRFLAGRLLNDTGFKLLNGLLTLDPKNRFSATQALDHEWFTE 649          
The following BLAST results are available for this feature:
BLAST of CF835955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CD11A_HUMAN3.517e-3851.66Cell division protein kinase 11A OS=Homo sapiens G... [more]
CDKG2_ORYSJ4.593e-3849.68Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSI4.593e-3849.68Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
PHO85_YEAST5.999e-3849.67Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
CDK16_HUMAN7.835e-3852.41Cell division protein kinase 16 OS=Homo sapiens GN... [more]
KP58_DROME1.337e-3751.30Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]
CDKG1_ORYSJ1.746e-3749.03Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI1.746e-3749.03Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDK11_RAT1.746e-3750.99Cell division protein kinase 11 OS=Rattus norvegic... [more]
YP62_CAEEL2.280e-3751.33Putative serine/threonine-protein kinase B0495.2 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C24_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835955 ID=CF835955; Name=CF835955; organism=Citrus sinensis; type=EST; length=690bp
TACATATCTCCTATTAAAAGAAAAACTGGCACAAACATTTATCCACCAGA
TCTAGAAAGCCGCGAATACACGATTACAAACTAGGCAAATCCAGAGATGA
CTGTAAAAAGCCATTCCATGTAGTAAGACTTTTCAGTAAAACTGCAAGTA
AAGACAGTCGGCAAATTTCGCAAACAATCAAAACCGAAGGCTTCACAATA
ATGTCAACACTCTAATAGCATATACAACAGATATTAGGGTACAAATTCGA
CGTCCCTGAAGTATTCATGTTCTAGAGCACTTCTGGCAGTAATTCTTCTG
CTTGGATCCATGCAGAGCATTTTAAAAAGGAGATCAATGCCAGCTGGCTC
AAGATTTCGAACAACAGTCCCCAACTCCTTAGAAGGCCATTTTGGAAAGG
CAGATTTAAAGTCAGGCAATGAAGTCACTCCAGGCCATGTGTCCTCATTA
GGTGTTCCCAAGACTCTGAAGATCTTGAATAACTCATCAATCTCAGAGTC
TCCTGGAAACAATGGCCGCTGGTTCACCATCTCAGCAAATATACATCCCA
CCGACCACACATCAACTGGAGTAGAGTAATGGCGAGATCCTAGTAATATT
TCAGGTGCTCTGTACCACAATGTCACCACCTCATGTGTAAATGTCCTAAC
AGGAATACCAAAAGCCCTGGCCAGTCCAAAATCTGCTAGC
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