CF835985
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_STRS7 (50S ribosomal protein L15 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rplO PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ L P GS ++G G + G G +GQK+RSG GVR GFEGGQ PL+RRIPK G + +Y VNL + A F +G EV+ LK G++ R K +KILG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 2 KLHELKPAKGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRIPK----RGFTNINTKEYALVNLDQLNA--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_STREM (50S ribosomal protein L15 OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=rplO PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ L P GS ++G G + G G +GQK+RSG GVR GFEGGQ PL+RRIPK G + +Y VNL + A F +G EV+ LK G++ R K +KILG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 2 KLHELKPAKGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRIPK----RGFTNINTKEYALVNLDQLNA--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_STRE4 (50S ribosomal protein L15 OS=Streptococcus equi subsp. equi (strain 4047) GN=rplO PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ L P GS ++G G + G G +GQK+RSG GVR GFEGGQ PL+RRIPK G + +Y VNL + A F +G EV+ LK G++ R K +KILG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 2 KLHELKPAKGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRIPK----RGFTNINTKEYALVNLDQLNA--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_STRGC (50S ribosomal protein L15 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplO PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22 Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ L P GS ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK G ++ +Y VNL + A F +G EV+ L G++ + K +KILG+GEL+KKL KA FS SA+E + A G ++ V+ Sbjct: 2 KLHELQPAAGSRKVRNRVGRGTSSGNGKTAGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFLNVNRKEYAIVNLDQLNA--FEDGAEVTPVVLVESGIV----KAEKSGVKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_MACCJ (50S ribosomal protein L15 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplO PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22 Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ + P G+ +A+G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK G + Y VNL + F +G E++ +L G+++ K +K+LG+GELSKKL KA FS SAKE +E G T V+ Sbjct: 2 KLHEMKPVEGARKERNRVGRGMASGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRLPK----RGFTNINRKDYAIVNLDQLNR--FEDGTEITPASLIETGVVS----NEKSGIKVLGNGELSKKLTVKAHKFSASAKEAIEGKGGTTEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_CLOTH (50S ribosomal protein L15 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplO PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22 Identity = 67/155 (43.23%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L L P PGS G G + G G +GQ +RSG GVR GFEGGQMPLYRR+PK G + Y VN+ + A F +G V+ E LK KG+I ++ + ILG+GEL KKL KA FS +A EK+EAAG + V+ Sbjct: 2 KLFELQPAPGSKKLPKRKGRGHGTGNGKTAGRGHKGQNARSGGGVRPGFEGGQMPLYRRVPK----RGFTNIFSKVYTEVNVSALNA--FDDGTVVTQELLKEKGII----KKINDGVVILGNGELKKKLTVKAARFSKTAAEKIEAAGGKVEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_LISW6 (50S ribosomal protein L15 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplO PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.394e-22 Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 +L+ L P GS +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK G + ++ VNL + F +G EV+ E L G+I R K +KIL DG + KKL KA FS +AKE +EAAG Sbjct: 2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLIESGII----RNEKSGIKILSDGNIEKKLTVKANKFSAAAKEAIEAAG 140
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_LISIN (50S ribosomal protein L15 OS=Listeria innocua GN=rplO PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21 Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 +L+ L P GS +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK G + ++ VNL + F +G EV+ E L G+I R K +KIL DG + KKL KA FS +AKE +EAAG Sbjct: 2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLIETGII----RNEKSGIKILSDGNIEKKLTVKANKFSAAAKEAIEAAG 140
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_STRT2 (50S ribosomal protein L15 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rplO PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21 Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ L P GS ++G G + G G +GQK+RSG G+R GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ LK G+I R K +K+LG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGVGLRPGFEGGQTPLFRRLPK----RGFTNINAKEYTLVNLEQLNV--FEDGTEVTPVVLKEAGII----RAEKSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_STRT1 (50S ribosomal protein L15 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rplO PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21 Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+ L P GS ++G G + G G +GQK+RSG G+R GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ LK G+I R K +K+LG+GEL+KKL KA FS SA+ + A G ++ V+ Sbjct: 2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGVGLRPGFEGGQTPLFRRLPK----RGFTNINAKEYTLVNLEQLNV--FEDGTEVTPVVLKEAGII----RAEKSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146 The following BLAST results are available for this feature:
BLAST of CF835985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835985 ID=CF835985; Name=CF835985; organism=Citrus sinensis; type=EST; length=661bpback to top |