CF836017

Overview
NameCF836017
Unique NameCF836017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.315e-53
Identity = 105/177 (59.32%), Postives = 130/177 (73.45%), Query Frame = 3
Query:  279 DWLGREMLEMRLRDQVDN----DEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            D L   M +MRLR+   +    +ED+D EP I++G G ETG VI TT+GGR+G  KQ +SY+A+ VVGTGSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQIM++ DHPN+V L+H FFSTTDK              TV R  ++Y++++Q MP+I V+LYTYQICRAL Y+H
Sbjct:   74 DQLPEVMNDMRLREDEPHANRGEEDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEFVPETVYRALKHYTKMNQHMPIILVQLYTYQICRALNYLH 250          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.607e-51
Identity = 96/162 (59.26%), Postives = 122/162 (75.31%), Query Frame = 3
Query:  312 LRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            L+ + D D D++    +I+G  A TGH+I TTIGG+NG  KQ +SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+++DHPN+V+LKHCFFSTT +              T+ R+ ++Y+  +QRMP+ YVKLYTYQI R LAYIH
Sbjct:   27 LKRRPDIDNDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKHYTSSNQRMPIFYVKLYTYQIFRGLAYIH 188          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.108e-51
Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = 3
Query:  312 LRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            L+ + + D D++    +I+G  A TGH+I TTIGG+NG  KQ +SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+ +DHPN+++LKHCFFSTT +              T+ R+ R+Y+  +QRMP+ YVKLYTYQI R LAYIH
Sbjct:   25 LKRRPELDSDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRPMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLRHYTSSNQRMPIFYVKLYTYQIFRGLAYIH 186          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.108e-51
Identity = 94/155 (60.65%), Postives = 117/155 (75.48%), Query Frame = 3
Query:  336 EDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            +D++    ++DG    TGH+I TTIGG+NG  KQ +SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+++DHPN+V LKHCFFSTT K              ++ R+ ++YS  +QRMPL+YVKLY YQI R LAYIHN
Sbjct:    3 DDKEMPAAVVDGHDQVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVVCLKHCFFSTTSKDELFLNLVMEYVPESLYRVLKHYSSANQRMPLVYVKLYMYQIFRGLAYIHN 157          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.916e-46
Identity = 91/160 (56.88%), Postives = 113/160 (70.62%), Query Frame = 3
Query:  318 DQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            D +  +   D +  II G G E+G +I T   G N    + +SY AEHV+GTGSFGVVFQAKC ET E VAIKKVLQDKRYKNRELQIM+MLDHPN+V LKH FFSTT+K              T+ R +R+Y++++Q MPLIY++LYTYQICRA+ Y+H
Sbjct:   59 DHLPKEIREDMDCGIIKGNGTESGRIITTKKKGLNDQKDKTISYRAEHVIGTGSFGVVFQAKCLETEEKVAIKKVLQDKRYKNRELQIMRMLDHPNVVELKHSFFSTTEKDELYLNLVLEYVPETIYRASRSYTKMNQHMPLIYIQLYTYQICRAMNYLH 218          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  366 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P+IYVKLY YQ+ R+LAYIH+
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  366 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P+IYVKLY YQ+ R+LAYIH+
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  366 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P+IYVKLY YQ+ R+LAYIH+
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: GSK3B_HUMAN (Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  366 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P+IYVKLY YQ+ R+LAYIH+
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.198e-30
Identity = 69/122 (56.56%), Postives = 88/122 (72.13%), Query Frame = 3
Query:  438 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            ++SY  + V+G GSFGVVF AK   T E+VAIKKVLQDKR+KNRELQIM+ L+HPNIV LK+ F+S+ D K              TV R+AR+YS+  Q +P+IYVKLY YQ+ R+LAYIH+
Sbjct:   33 EISYYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGDKKDELYLNLILEYVPETVYRVARHYSKQRQSIPMIYVKLYMYQLLRSLAYIHS 154          
The following BLAST results are available for this feature:
BLAST of CF836017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
KSGT_BRANA1.315e-5359.32Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG6_ARATH1.607e-5159.26Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH6.108e-5158.64Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG7_ARATH6.108e-5160.65Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG2_ARATH5.916e-4656.88Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
GSK3B_SPECI1.415e-3151.37Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]
GSK3B_RAT1.415e-3151.37Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE1.415e-3151.37Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]
GSK3B_HUMAN1.415e-3151.37Glycogen synthase kinase-3 beta OS=Homo sapiens GN... [more]
GSK3_CAEBR1.198e-3056.56Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836017 ID=CF836017; Name=CF836017; organism=Citrus sinensis; type=EST; length=801bp
TTTAATTGCTTCCATTTTCATCTCATAAGCGTTCAAATTTTGTGAAGCTG
AAAGCTGCAGAATGCGTGGAATTTGCTTCCACTTCTCGTTCAAGCGCTTC
CAGGAAGATAGGTGTTTGGGTGGTACAGAAGGCACGACCTCAGAGCATCT
GGAGGGTAGCGAATACTAGTATCTGGAATACTCTCGAGTTTGTATAAATG
GCATCTGCCAGCCTAGGGAATGGGGGAGTGGGCAGTTCCAGGTCTGTTAA
CGGCTTCAAGAGTTCATCAAGTTCGGTTGACTGGTTGGGGAGAGAAATGC
TTGAAATGAGATTGCGGGACCAGGTGGACAATGATGAAGACAGAGATAGT
GAACCAGATATCATTGATGGTGTGGGTGCTGAAACTGGACACGTCATACG
AACAACGATTGGTGGTCGAAATGGCAATTCTAAGCAGAAAGTTAGTTATA
TAGCTGAGCATGTGGTTGGAACTGGTTCTTTTGGTGTTGTCTTTCAAGCA
AAATGTAGAGAAACTGGAGAGATTGTTGCTATCAAGAAGGTTCTCCAAGA
CAAGCGCTATAAGAATAGGGAGTTACAGATTATGCAGATGTTGGACCATC
CAAATATTGTTGCCCTTAAGCATTGTTTCTTTTCAACAACAGACAAGGAA
GAGCTTTACTTGAATCTTGTGCTTGAATATGTTCCTGAAACCGTTAATCG
AATTGCAAGGAACTACAGCAGGATCCACCAGCGGATGCCCTTAATATATG
TTAAACTCTATACCTATCAGATCTGTAGGGCACTTGCTTATATACATAAT
T
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