CF836031

Overview
NameCF836031
Unique NameCF836031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.025e-57
Identity = 114/202 (56.44%), Postives = 139/202 (68.81%), Query Frame = -1
Query:  211 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 813
            SV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGLN ++DLVALSG HTFG+ QC+F   RL+NF+ TG PDP            LCP  GN S L + DL TP  FDN Y+ NL+   GL+QSDQELFS+P A DTIP+V +F+++   FF +F  +M RMGN++ LTGTQG+IR NCR VN+N+L
Sbjct:  138 SVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSL 339          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.645e-57
Identity = 114/202 (56.44%), Postives = 136/202 (67.33%), Query Frame = -1
Query:  211 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 813
            SVNL+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F  VGL+  +DLVALSG HTFG+ QC+F   RL+NF+ TG PDP             CP  GN SVL + DL TP  FDN Y+ NL+   GL+QSDQELFS+P A DTIP+V +F+     FF +F  +M RMGN++ LTGTQGEIR NCR VN+N+L
Sbjct:  136 SVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSL 337          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 7.695e-57
Identity = 111/202 (54.95%), Postives = 138/202 (68.32%), Query Frame = -1
Query:  211 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 813
            +VNL+GGPSW VPLGRRD   A  +LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ TG PDP             CP+ GN +VL + DL TP  FDN Y+ NL+   GL+Q+DQELFS+P A DTIP+V  ++     FF +F  +M RMGN++ LTGTQG+IR NCR VN+N+L
Sbjct:  137 AVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNITPLTGTQGQIRQNCRVVNSNSL 338          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.714e-56
Identity = 112/201 (55.72%), Postives = 137/201 (68.16%), Query Frame = -1
Query:  214 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANN 813
            SV L+GGPSW VP GRRD       LA+ NLP PF TL+ LK RF NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ TG PDP             CP+ GN SVL + DL TP  FDN Y+ NL+ N GL+QSDQELFS+P A DT+P+V  ++  +  FF++FA +MIRM +LS LTG QGEIR NCR VN+ +
Sbjct:  130 SVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKS 330          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.239e-56
Identity = 112/202 (55.45%), Postives = 136/202 (67.33%), Query Frame = -1
Query:  211 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 813
            SV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSGAHTFG+ QC+F   RL+NF+ TG PDP             CP+ GN SVL + DL TP  FDN Y+ NL+   GL+QSDQELFS+P A DTIP+V  ++     FF +F  +M RMGN++  TGTQG+IR NCR VN+N+L
Sbjct:  139 SVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSL 340          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.111e-55
Identity = 112/202 (55.45%), Postives = 134/202 (66.34%), Query Frame = -1
Query:  211 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 813
            SV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ TG PDP            LCP  GN S L + DL TP  FDN Y+ NL+   GL+QSDQELFS+P A DTIP+V  ++     FF +F  +M RMGN++  TGTQG+IR NCR VN+N+L
Sbjct:  138 SVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSL 339          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.475e-55
Identity = 110/199 (55.28%), Postives = 134/199 (67.34%), Query Frame = -1
Query:  220 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNA 813
            SV L+GGPSW VP GRRD       LA+ NLP P  TL +LK +F NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ +G PDP             CP+ GN SVL + DL TP  FDN Y+ NL+ N GL+QSDQELFS+P A DTIP+V  ++  +  FF++F  +MIRMGNLS  TG QGEIR NCR VN+
Sbjct:  132 SVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVNS 330          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.407e-55
Identity = 108/201 (53.73%), Postives = 135/201 (67.16%), Query Frame = -1
Query:  214 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTP-GADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANN 813
            S+ L+GGPSW VP GRRD       LA+ NLP P  TL  LK RF NVGL+ ++DLVALSG HTFG++QCQF   RL+NF  TG PDP             CP+ GN SVL + DL TP  FDN Y+ NL+ N GL+QSDQELFS+P  ADT+P+V  ++  +  FF++F  ++IRM +LS LTG QGEIR NCR VN+ +
Sbjct:  130 SIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVNSKS 330          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.836e-50
Identity = 106/198 (53.54%), Postives = 134/198 (67.68%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNG-TGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SV L+GGPS  V LGRRDGRTA R+ A   LP    +L++L  +F+   L D TDLVALSGAHTFGR QC   + RL NF+G +G  DP             CPQGG+ +   NLD ++PD FDNDYF NLQ N G+++SDQ LFS+ GA T+ +VN F+ N+  FF +FA SMI+MGN+ +LTG +GEIR +CRRVN
Sbjct:  133 SVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNL-DTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.111e-50
Identity = 106/197 (53.81%), Postives = 130/197 (65.99%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SVNL+GGP W V LGRRD R AN   A   LP+PF+ +  LK +F  V L D+TDLVALSGAHTFG+++CQFF +RL       NPD              C  G +  V  NLD +TP+ FD +Y++NLQ+N G L SDQ L STPG DT+ IVN F++++  FFESF  SMI MGN+  LTG QGEIRSNCRR+N
Sbjct:  103 SVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQACSSGRDTFV--NLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292          
The following BLAST results are available for this feature:
BLAST of CF836031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1A_ARMRU2.025e-5756.44Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1B_ARMRU2.645e-5756.44Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER32_ARATH7.695e-5754.95Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER37_ARATH1.714e-5655.72Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER33_ARATH2.239e-5655.45Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER34_ARATH1.111e-5555.45Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER2_ARMRU2.475e-5555.28Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER38_ARATH9.407e-5553.73Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER58_ARATH1.836e-5053.54Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_CUCSA9.111e-5053.81Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836031 ID=CF836031; Name=CF836031; organism=Citrus sinensis; type=EST; length=813bp
CCCCTCAGTTTTTTTTTTTTTTTTCCATTTCCAACGGGCTCATAATTTTA
TTCACATTTTGAAAATATTGTTAGGACAAACACGAGACAAGGTACCTTAG
TTTGTTACCCACAAACTCTCAACAGCAAAACTACTTCACACAGTTTTATT
TTATGCTTTCATGATTTAGATAGAGCTGACCAAACCGCCATCTGATGATG
ATCTGGTTGATAAATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATC
TCTCCTTGAGTCCCTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGA
AACCGCAAAGCTTTCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGA
CAATGGGAATGGTATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTC
TGTAAAAGGCCATTGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAA
ACCATCCGGTGTTGAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCAC
CTTGCGGGCACAGCTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTT
GGGTCTGGATTGCCAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAA
TTGACACTGTGCCCTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGAT
CAGTATTGTCGTTGAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCA
AGAGTCTGAAATGGTGTTGGAAGATTCTGATCTGCAAGGCTCCTGTTCGC
TGTCCTGCCGTCTCTTCTTCCCAGTGGAACTGTCCATGAAGGACCACCTG
ACAAATTGACGGA
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