CF836031

Overview
NameCF836031
Unique NameCF836031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22
Identity = 74/198 (37.37%), Postives = 98/198 (49.49%), Query Frame = -1
Query:  205 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 798
            GG ++TV LGR D  TAN S A   LP P   L +   +F++       ++VAL+GAHT G A+C            +GN +P             C      S L  LD +TP  FD  Y+ NL  N G++ SDQ L  T    T   V  +S+N T F E FA +MI+MGNL    G Q EIR  C RVN  ++++
Sbjct:  182 GGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARCSTVCT-------SGNVNPAAQLQCN------CSATLTDSDLQQLD-TTPAVFDKVYYDNLNNNQGIMFSDQVL--TGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVNPTSVAS 362          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22
Identity = 67/164 (40.85%), Postives = 86/164 (52.44%), Query Frame = -1
Query:  193 FTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCP-QGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSS 681
            F N  L D  DLV+LSGAHTFG A C  F  R    +     +P             C     +G++   LD+ TPD FDN Y+ +L A  GL +SDQ L   P   T  +   FS N+ AFFE FA SM +M N+ +LTGT+GEIR+NC   N    ++R  S
Sbjct:    7 FANRSL-DVADLVSLSGAHTFGVAHCPAFEDR----SSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHP--TTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPNRRVRTSRPPS 163          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.791e-21
Identity = 68/200 (34.00%), Postives = 98/200 (49.00%), Query Frame = -1
Query:  211 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 810
            V + GGP + V LGR+DG  +       N+P   QT+  + G F   G +   ++VALSGAHT G + C+ FS RL+        +P                  + ++    D+ TP  FDN YF NL+   GLL SD  L       T P V+ +++NETAFFE FA +M ++G + +     GE+R  C   N  N+
Sbjct:  141 VTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLR-EMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTV---DDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNS--TKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLNV 334          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.791e-21
Identity = 74/203 (36.45%), Postives = 103/203 (50.74%), Query Frame = -1
Query:  205 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 813
            SV   GG +++V LGR D RTAN S A   LP PF  L +   +F++       ++VAL+GAHT G A+C            +GN +P             C      S L  LD +TP  FD  Y+ NL +N G++ SDQ L  T  A T   V ++S++   F   FA +MI+MG+L    G Q EIR  C RVN  ++++
Sbjct:  178 SVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLR-EMVALAGAHTVGFARCSTVCT-------SGNVNPAAQLQCN------CSATLTDSDLQQLD-TTPTMFDKVYYDNLNSNQGIMFSDQVL--TGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTSVAS 363          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 67/189 (35.45%), Postives = 90/189 (47.62%), Query Frame = -1
Query:  223 SWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 789
            ++ + LGR+D RTAN + A+  LP PF  L +   +F + G N   ++V L+GAHT G ++C        N N   +                CP   N + L  LD S P  FD  YF  L    GLL SDQEL  +    T+  V  +     AF   FA +M++M NL    G Q EIR+ C RVN
Sbjct:  175 TYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRCAVLCTST-NLNQNRS----------ATLQCTCPASANDTGLVGLDPS-PGTFDKKYFEELVKGQGLLFSDQELMQSNA--TVTAVRRYRDATGAFLTDFAAAMVKMSNLPPSAGVQLEIRNVCSRVN 348          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 68/192 (35.42%), Postives = 98/192 (51.04%), Query Frame = -1
Query:  223 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 798
            GGP + V LGRRD RT+  SL    LP P   +  +  +F + G     ++VALSGAH+ G + C+ F  R+   N   NP                P+    SV    D+ TP+ FDN Y+ NL+   GLL+SD  L+S P   T   V+ ++ N+  FF+ FA +M ++    + TG +GEIR  C  +N
Sbjct:  133 GGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRVGRNNTGYNP---RFAVALKKACANYPKDPTISVFN--DIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDP--RTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 73/203 (35.96%), Postives = 101/203 (49.75%), Query Frame = -1
Query:  205 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 813
            SV   GG ++ V LGR D RTAN + A   LP PF  L +   +F +       ++VAL+GAHT G A+C            +GN +P             C      S L  LD +TP  FD  Y+ NL  N G++ SDQ L  T  A T   V ++S++ + F   FA +MI+MG+L    G Q EIR  C RVN  ++++
Sbjct:  177 SVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARCSTVCT-------SGNVNPAAQLQCN------CSATLTDSDLQQLD-TTPTMFDKVYYDNLNNNQGIMFSDQVL--TGDATTAGFVTDYSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTSVAS 362          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 70/194 (36.08%), Postives = 95/194 (48.97%), Query Frame = -1
Query:  223 GPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTI--PIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 795
            GP + VP GRRDG  AN   A +NLP    +++ LK +F   GL+D  DLV LS GAHT G   C F   RL   + T NP+              CPQGG+ +V   LD  +   FDN  F N++   G++ SD  L+       I    +    S++  F   F  +MI+MG + +  G +GEIR  C   N
Sbjct:  134 GPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRLDAQDPTINPE------FFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 64/200 (32.00%), Postives = 98/200 (49.00%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGN---PDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V  +GGP   +P GRRDG+ +  +    N+     TLD +   F++ GL+   DLV LSGAHT G + C  F+ R F  +  GN    D              C    + S+  + D  T   FDN Y+ NL+ + GL Q+D  L       T+  V   +S+E +FF+ ++ S +++  + +  G  GEIR +C  VN
Sbjct:  131 AVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGR-FQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTM--VEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20
Identity = 60/196 (30.61%), Postives = 98/196 (50.00%), Query Frame = -1
Query:  223 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 810
            +++ GGP   V  GR+D   ++ +  +  L  P  T+D +   F + GL    ++VAL GAHT G + C+ F+ R+FN +    P                    +  +    D+ TP  FDN Y+ NL+   GLLQSD  +       T  +V+ ++ +ETAFF++FA +M ++   ++ TG  GE+R  C + N
Sbjct:  130 ISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQ-EMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNR--TRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
The following BLAST results are available for this feature:
BLAST of CF836031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_SOLLC8.038e-2237.37Suberization-associated anionic peroxidase 2 OS=So... [more]
PER2_HORVU8.038e-2240.85Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER65_ARATH1.791e-2134.00Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER1_SOLLC1.791e-2136.45Suberization-associated anionic peroxidase 1 OS=So... [more]
PERN_IPOBA5.210e-2135.45Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER31_ARATH5.210e-2135.42Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PERX_SOLTU1.980e-2035.96Suberization-associated anionic peroxidase OS=Sola... [more]
PER13_ARATH1.980e-2036.08Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER46_ARATH3.377e-2032.00Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER6_ARATH9.825e-2030.61Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836031 ID=CF836031; Name=CF836031; organism=Citrus sinensis; type=EST; length=813bp
CCCCTCAGTTTTTTTTTTTTTTTTCCATTTCCAACGGGCTCATAATTTTA
TTCACATTTTGAAAATATTGTTAGGACAAACACGAGACAAGGTACCTTAG
TTTGTTACCCACAAACTCTCAACAGCAAAACTACTTCACACAGTTTTATT
TTATGCTTTCATGATTTAGATAGAGCTGACCAAACCGCCATCTGATGATG
ATCTGGTTGATAAATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATC
TCTCCTTGAGTCCCTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGA
AACCGCAAAGCTTTCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGA
CAATGGGAATGGTATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTC
TGTAAAAGGCCATTGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAA
ACCATCCGGTGTTGAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCAC
CTTGCGGGCACAGCTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTT
GGGTCTGGATTGCCAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAA
TTGACACTGTGCCCTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGAT
CAGTATTGTCGTTGAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCA
AGAGTCTGAAATGGTGTTGGAAGATTCTGATCTGCAAGGCTCCTGTTCGC
TGTCCTGCCGTCTCTTCTTCCCAGTGGAACTGTCCATGAAGGACCACCTG
ACAAATTGACGGA
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