CF836037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALPB (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALPA (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALHS (L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg (strain SL476) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALG2 (L-lactate dehydrogenase [cytochrome] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALEP (L-lactate dehydrogenase [cytochrome] OS=Salmonella enteritidis PT4 (strain P125109) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALDC (L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain CT_02021853) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 70/254 (27.56%), Postives = 119/254 (46.85%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGL-----------------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ + MP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + P L+ ++ + Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLPMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254
BLAST of CF836037 vs. ExPASy Swiss-Prot
Match: LLDD_SALAR (L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 73/255 (28.63%), Postives = 122/255 (47.84%), Query Frame = 3 Query: 30 ITNVMEYHALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL 722 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y+GK +D ++AN D S++WKD++W++ P+++KG+L Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGIL 254 The following BLAST results are available for this feature:
BLAST of CF836037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836037 ID=CF836037; Name=CF836037; organism=Citrus sinensis; type=EST; length=724bpback to top |