CF836068

Overview
NameCF836068
Unique NameCF836068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF836068 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = -3 
Query:  582 QKVVKGNPNPRSYYKCT-HPGCPVRKHVERASHDFRAVIPTYEGKHNHDVP 731
            QK+ KGNP PR+YY+CT    CPVRK V+R S D   +I TYEG HNH +P
Sbjct:  201 QKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLP 251
[Close]
BLAST of CF836068 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = -3 
Query:  579 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDFRAVIPTYEGKHNHDVPA 731
            QK VK +P PRSYY+CT   C V+K VER+  D   VI TYEGKHNH +P+
Sbjct:  146 QKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIPS 196
The following BLAST results are available for this feature:
BLAST of CF836068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
WRK61_ARATH4.059e-1158.82Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK71_ARATH6.923e-1158.82Probable WRKY transcription factor 71 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02F20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02F20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836068 ID=CF836068; Name=CF836068; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTTTTTTTTCCTTTTTAACCCATTAAAGCTTCTATATGTATA
TATACCTACAATTTTGAATATACATTACAAAATGGGGTAAAAATATACAA
ACAAACAAACAAACAAAATGCAATTAACAAATGAAGGGAATATTCTTATT
CTTCTGAATTCTATCAGTCTAACTCCCTTCCAAATGGGTAGAAACTGTAA
AATCTTTCCAATTCTGGGCAAGTTTCAAAATAGCAATGACTCAAAAAATG
GGTCATGATCCCTTGGTTCTTCCTTGGCTCTTGAAAACACATTGTCTTGC
TGCTGACCCTCATTCATATAAAACCCCAAAGCATTTCCATATCCAGGAAA
GCCAAAGCTGCCGCTGCCCTGCAACATTTCAAGGGTATAGGGGGCTTGGC
CTTCAAATGAGGATACCCTCAAATTGTGAACAGGATTGAAAATCAAGTTG
TTGTTAGGATGATGACCCACCCCCGATGCCCTTATGGGCAGCGTCCCGTT
GTTGTTACTATTGCCGTTACTGTTACGGTTATTATTGCTGCTGTTATCCG
GCAAAACCCTGCTGCCGCTGCCGCAAGCTGCCGGAACATCATGGTTGTGC
TTTCCCTCATAGGTTGGGATCACTGCTCTAAAATCGTGGGATGCTCTCTC
AACATGCTTTCTCACTGGACAACCTGGATGCGTACACTTGTAATAACTCC
TTGGATTTGGATTCCCCTTTACAACTTTTTGGC
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