CF836091

Overview
NameCF836091
Unique NameCF836091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836091 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.733e-47
Identity = 99/226 (43.81%), Postives = 144/226 (63.72%), Query Frame = 3 
Query:   63 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDL 734
            +K++ L +GGTG+IG+FI +AS+  G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINEL 235
The following BLAST results are available for this feature:
BLAST of CF836091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN2.733e-4743.81Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836091 ID=CF836091; Name=CF836091; organism=Citrus sinensis; type=EST; length=738bp
ACAAAACAGGCAATAAAGGAAAGAATCCCCGAAATTGAACTGAACAAGTC
TCGTTAATGGCGTCGAAAAGCAAGATTCTATTCATCGGTGGGACAGGGTA
CATCGGCAAATTCATCGTCGAAGCGAGCGTGAAAGCCGGCCACCCGACGT
TCGTGCTCGTGAGAGAATCCACACTCTCCGCTCCTTCCAAATCTCAGCTC
CTCGATCACTTCAAAAAACTCGGCGTCAATCTCGTCATCGGAGATGTGTT
GAATCACGAGAGCTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATAT
CAACGGTCGGTCACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCC
ATTAAAGAAGCTGGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAA
TGATGTTGATCGAGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCA
CAAAGGCGAAAATCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACT
TATGTAGCGTCGAATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCA
GCCCGGGGCCACTGCCCCACCTAGGGATAAAGTTGTCATCTTAGGCGATG
GAAATCCTAAAGCTGTTTATAACAAGGAAGATGATATTGGAACCTATACT
ATCAAAGCGGTTGATGATCCCAGAACCTTGAACAAAATCCTTTACATTAA
ACCCCCTGGTAATATTTACTCATTCAATGATCTTGTGT
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