CF836095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: TOM1_DICDI (Target of Myb protein 1 OS=Dictyostelium discoideum GN=tom1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 45/114 (39.47%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 85 MVNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK-IARKKPDTHVKEKILILIDTWQEAF 423 MV +VD+AT+++LI DW ++I D+LN DP A+ VV+ + K++ R S+V LLAL L +++++NC H++ AE+ E+ + I KK +VKEK L ++++W AF Sbjct: 1 MVTELVDKATNELLIQTDWTTVLQISDILNRDPIHARGVVRQVTKKLKDR-SRVILLALELADSLLQNC-HCTHVYFAERTFQTELCRLIMNKKTKLNVKEKTLEIVESWGNAF 112
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: STAM2_MOUSE (Signal transducing adapter molecule 2 OS=Mus musculus GN=Stam2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.037e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 100 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 423 V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL + NCG I H+ V ++ E+ + + K V EK+ L+ W E F Sbjct: 13 VEKATNEYNTTEDWSLIMDICDRVGSTPSGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRSVIKNKAHPKVCEKLKSLMVEWSEEF 120
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: STAM2_RAT (Signal transducing adapter molecule 2 OS=Rattus norvegicus GN=Stam2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 100 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 423 V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL + NCG I H+ V ++ E+ + + K V EK+ L+ W E F Sbjct: 13 VEKATNEYNTTEDWSLIMDICDRVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 120
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: STAM2_HUMAN (Signal transducing adapter molecule 2 OS=Homo sapiens GN=STAM2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 100 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 423 V++AT++ DW++ ++ICD + P AKD +K I KR+ + V L ALTLL + NCG I H+ V ++ E+ + + K V EK+ L+ W E F Sbjct: 13 VEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 120
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: VPS27_YARLI (Vacuolar protein sorting-associated protein 27 OS=Yarrowia lipolytica GN=VPS27 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.538e-13 Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 88 VNSMVDRATSDMLIG--PDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARK-KPDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRSERSAPV 525 ++ V++ATS+ L D A+N+EICD++ AKD ++ +K+R+ +RN VQL AL L + IKN G + +A + + ++ IAR + V++++L L+ W AF G +L G FP S +A V Sbjct: 10 IDEQVEKATSESLPSGESDLALNLEICDLIRSKTVPAKDAMRSLKRRLLNRNPNVQLAALQLTDVCIKNGGSHFLVEIASREFVDPLMAIARNDDANPEVRQRVLQLLQQWAVAFAG-QLQLQQVENAVTQLKSEGVSFPSASHDNAAV 157
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: VPS27_PHANO (Vacuolar protein sorting-associated protein 27 OS=Phaeosphaeria nodorum GN=VPS27 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12 Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 58 WLGESERAEMVNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARK----KPDTHVKEKILILIDTWQEAFGG 429 W G S + + ++RATS L D +N+EI D++ Q KD +K +KKRIG +N VQL L L +T +KN G +A + + + + + P+ VK K+L LI +W A G Sbjct: 4 WFGSSTNSAF-DEQIERATSSSL--EDMPLNLEISDVIRSKTVQPKDAMKSLKKRIGHKNPNVQLATLNLTDTCVKNGGAHFIQEIASREFMDNLTSLLKAPSTIAPNNDVKNKMLELIQSWATAAEG 128
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: HRS_DROME (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Drosophila melanogaster GN=Hrs PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.017e-12 Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 100 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 423 ++ ATS + + PDW + ICD +N K+ IKK++ S N +L +LE+I+KNCG VH V K P +V++K+L L+ TW AF Sbjct: 10 LENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF 117
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: HSE1_USTMA (Class E vacuolar protein-sorting machinery protein HSE1 OS=Ustilago maydis GN=HSE1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12 Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 97 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQA-KDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTH--VKEKILILIDTWQEAF 423 +V +ATSD L +W +N+E+CD ++ A ++ + I+KR+ RN+ VQL ALTL + + KNCG H +A ++ + +I + +TH VK++ L+ W F Sbjct: 11 IVLKATSDELTSENWELNLEVCDKVSSGGDTAARNCIAAIQKRLVHRNANVQLYALTLADAVAKNCGLAAHQEIASRSFTQTLARICLDR-NTHSTVKKRCSALVKEWAGEF 121
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: HSE1_COCIM (Class E vacuolar protein-sorting machinery protein HSE1 OS=Coccidioides immitis GN=HSE1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 91 NSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTH--VKEKILILIDTWQEAF 423 + +V +AT + L +W +++CD ++ D AKD V + KR+ RN+ VQL L + +NCG H +A K+ ++++A + +TH VK KIL ++ W E F Sbjct: 10 DDIVAKATDENLTSENWEYILDVCDKVSADESGAKDAVASMIKRLAHRNANVQLYTFELANALSQNCGPKAHRELASKSFTDALLRLANDR-NTHPQVKSKILEHMEQWTEMF 121
BLAST of CF836095 vs. ExPASy Swiss-Prot
Match: HSE1_EMENI (Class E vacuolar protein-sorting machinery protein hse1 OS=Emericella nidulans GN=hse1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.460e-11 Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 100 VDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTH--VKEKILILIDTWQEAF 423 V +AT + L +W +++CD + + AKD V + KR+ RN+ VQL L L + +NCG +H +A ++ ++++A + +TH VK KIL ++ W E F Sbjct: 13 VAKATDENLTSENWEYILDVCDKVGAEESGAKDAVAALIKRLAHRNANVQLYTLELANALAQNCGPKIHRELASRSFTDALLRLAGDR-NTHQQVKSKILERMEDWTEMF 121 The following BLAST results are available for this feature:
BLAST of CF836095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836095 ID=CF836095; Name=CF836095; organism=Citrus sinensis; type=EST; length=748bpback to top |