CF836106

Overview
NameCF836106
Unique NameCF836106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.007e-33
Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            A + + VK +PGF G LP +   GYV V E     LFYY V+SE++P +DPL+LWL GGPGCS+F G  YE GP NF       SLP LHLNPYSW+K +S++++DSP G G SY+K       GD K       F  K
Sbjct:   37 APASAVVKSVPGFDGALPSKHYAGYVTVEEQHGRNLFYYLVESERDPAKDPLVLWLNGGPGCSSFDGFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYNTGDLKTAADSHTFLLK 175          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 133.65 bits (335), Expect = 6.397e-31
Identity = 63/130 (48.46%), Postives = 81/130 (62.31%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            LPGF G LP +   GYV V E     LFYY V+SE++P +DP++LWL GGPGCS+F G  YE GP NF       SLP LHLNPY+W+K ++++++DSP G G SY+K     + GD K       F  K
Sbjct:   40 LPGFDGALPSKHYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFDGFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLK 169          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28
Identity = 58/127 (45.67%), Postives = 77/127 (60.63%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQF 552
            LPGF G  P +   GYV + +  +  L+YYFV+SE+N   DP++LWL GGPGCS+  G  YE GP NF   + N  L  LHLNPYSW+K ++I+++DSPVG G+SY+         D K       F
Sbjct:   33 LPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMDGFVYEHGPFNFEPKKKNSHL--LHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTF 157          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24
Identity = 57/113 (50.44%), Postives = 72/113 (63.72%), Query Frame = 1
Query:  163 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            VK LPG Q P+ F    GYV V E+    LFY+F ++ +NP + P+LLWL GGPGCS+   G A E+GP        N S P L LNPYSW K A++LF++SPVG G+SY  T
Sbjct:   52 VKELPG-QPPVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPF----FPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNT 159          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.428e-22
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 1
Query:  199 FELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA 492
            F+  +GY  VG   +  L Y+FV+S+ NP  DP+LLWLTGGPGCS  S L  E GP N N    +G+  TL  NPYSW K ASIL +++P G GYSYA
Sbjct:   35 FKQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGPWNVNT---DGA--TLRTNPYSWNKNASILTLEAPAGVGYSYA 127          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 53/112 (47.32%), Postives = 68/112 (60.71%), Query Frame = 1
Query:  163 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            ++ LPG Q  + F    GYV V ES    L+YYFV++ K  +  PL+LWL GGPGCS+  G   E+GP         G   TL+ NPYSW   A+ILF++SPVGTG+SY  T
Sbjct:   80 IENLPG-QPSVSFRQYGGYVTVNESAGRSLYYYFVEATKTKKSLPLVLWLNGGPGCSSLYGAFQELGPFRI-----YGDGKTLYTNPYSWNNVANILFLESPVGTGFSYTNT 185          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 50/120 (41.67%), Postives = 73/120 (60.83%), Query Frame = 1
Query:  163 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGD 522
            ++ LPG    + F+   GYV V +     L+YYFV++ K     PL++W  GGPGCS+  G   E+GP     V  +G   TL  NPYSW  EA++LF+++PVGTG+SY+ +P+  + GD
Sbjct:   64 IQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLGGAFKELGPFR---VHSDGK--TLFRNPYSWNNEANVLFLETPVGTGFSYSNSPINGKQGD 178          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.694e-21
Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            +PG      F    GYV V E   A LFY+F ++  +P   PLLLWL GGPGCS+ + G+  E+GP + N    +G    +H+NPYSW + A+ILF+DSPVG GYSY+ T
Sbjct:    4 VPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNA---DGK--GVHMNPYSWNQVANILFLDSPVGVGYSYSNT 108          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.838e-21
Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
Query:  163 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY-AKTPLASQAGDFKQVQQ 540
            ++ LPG      F+  +GYV    +G  ++ Y   +S  NP  DPLL+W  GGPGCS+  GL  E+GP     V ++G   TL+ NPY+W  +A++L+++SP+G GYSY   TP   QA D +   Q
Sbjct:   24 IQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGLFEELGPF---YVNFDGQ--TLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQ 145          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.838e-21
Identity = 53/110 (48.18%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            LPG Q  + F    GYV V ES    +FY+F ++   P+E PL+LWL GGPGCS+   G   EIGP    +V+ NG+   L+ NPY+W KEA++LF++SPVG G+SY+ T
Sbjct:   54 LPG-QPDVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPF---LVDTNGN--GLNFNPYAWNKEANMLFLESPVGVGFSYSNT 157          
The following BLAST results are available for this feature:
BLAST of CF836106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CBP1_ORYSJ4.007e-3348.92Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
CBP1_HORVU6.397e-3148.46Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP21_ARATH5.069e-2845.67Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP34_ARATH7.574e-2450.44Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
YUA6_CAEEL5.428e-2253.06Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
SCP39_ARATH7.089e-2247.32Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP36_ARATH7.089e-2241.67Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
CBP22_HORVU2.694e-2147.27Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
YPP3_CAEEL7.838e-2140.16Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
SCP31_ARATH7.838e-2148.18Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836106 ID=CF836106; Name=CF836106; organism=Citrus sinensis; type=EST; length=569bp
TGAAGATTGTTCCCTAGTTGTTTCTCAAAGAAACTGGTTGGTTAAGACTT
AACATGCTGGAAAAGCCGAAAACAAACGCCAATGGACAAGCTTTGTTTTC
CTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGCATGCAGCTTGCAGCT
TCTTACTCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCCTT
TGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACAGC
TCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTCTC
TTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTTGC
TTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAGCT
TGCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCATA
TTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACCCC
ACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCAAT
TTTCTTCGAAAGTGGCTAT
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