CF836106

Overview
NameCF836106
Unique NameCF836106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.111e-18
Identity = 49/109 (44.95%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  175 PGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            PG Q  + F    GYV V       LFY+F ++  +P   PL+LWL GGPGCS+   G   EIGP    +V+  G+  +L  NPY+W KEA+ILF++SP G G+SY+ T
Sbjct:   36 PG-QPKVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPF---LVDNKGN--SLKFNPYAWNKEANILFLESPAGVGFSYSNT 138          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.384e-17
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA 492
            A +   V  LPG      F   +GY+      D  L Y+  +S + P +DPL+LWL GGPGCS+  GL  E+GP  F+V ++  S   ++ N Y+W K A++LF++SP G GYSY+
Sbjct:   20 APATDKVNDLPGLTFTPDFFHYSGYLRAWT--DKYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGP--FHVKDFGNS---IYYNEYAWNKFANVLFLESPAGVGYSYS 128          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.384e-17
Identity = 41/100 (41.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query:  211 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLAS 510
            +GY+ V E+ D   FY+F +S  +P+ DP++LWL GGPGCS+ +GL +E+G         N +L  +  NPYSW   ASI+++D PV  G+SY+ + +++
Sbjct:  124 SGYLDV-EADDKHFFYWFFESRNDPQNDPIILWLNGGPGCSSLTGLFFELGSSRI-----NENLKPI-FNPYSWNGNASIIYLDQPVNVGFSYSSSSVSN 216          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSE--KNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            LPG    + F   +GYV V E     LFY+ V+S   ++P+  PL+LWL GGPGCS+ + G A EIGP     V  +G   TLH   Y+W K A++LF++SP G G+SY+ T
Sbjct:   37 LPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFR---VGSDGK--TLHSKLYAWNKLANLLFLESPAGVGFSYSNT 143          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  211 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYS 486
            TGY+ V +  D  LF++F +S  +P  DP++LWL GGPGCS+ +GL  E+GP + N+            NP+SW   AS++F+D P+ TG+S
Sbjct:  590 TGYLDVED--DRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGLFMELGPSSINIETLKP-----EYNPHSWNSNASVIFLDQPINTGFS 674          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 51/125 (40.80%), Postives = 65/125 (52.00%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAY-EIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQV 543
            LPG Q  + F    GYV V       LFYY+V++ K P   PL LWL GGPGCS+  G A+ E+GP         G    L LN  SW K +++LFV+SP G G+SY+        GD   V  +
Sbjct:   35 LPG-QPNVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPF-----YPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNTGDKSTVNDM 153          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 51/132 (38.64%), Postives = 71/132 (53.79%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEK-NPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            LPG    + F +  GYV + ++    L+Y+F +++  +P   PL+LWL GGPGCS+   G   E+GP     V  NG   +L LN Y+W K A+ILF +SP G  +SY+ T      GD K  Q    F  K
Sbjct:   68 LPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFR---VHTNGE--SLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSMGDDKMAQDTYTFLVK 194          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            LPG    L F   +GYV V  +    LFY+  ++ +     PL+LWL GGPGCS+ + G + E+GP   N    +G   TL LN Y+W K A++LF+DSP G G+SY  T
Sbjct:   41 LPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNP---DGK--TLRLNLYAWNKVANVLFLDSPAGVGFSYTNT 145          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA 492
            A     +  LPG      F   +GY+   +S      Y+FV+S+ +P+  P++LWL GGPGCS+  GL  E GP    +++ +G   TL  NPY+W   A++L+++SP G G+SY+
Sbjct:   24 APDQDEIDCLPGLAKQPSFRQYSGYLRASDS--KHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLDGLLTEHGPF---LIQPDG--VTLEYNPYAWNLIANVLYIESPAGVGFSYS 132          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 53/134 (39.55%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  163 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSE--KNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQF 552
            V+ LPG    + F    GYV V  +    LFYY  ++      +  PLLLWL GGPGCS+   G   E+GP     V  +G   TL+ NPYSW   A++LF++SP G GYSY+ T     ++GD    +   QF
Sbjct:   86 VEALPGHPRGVDFAQYAGYVTVDAAAGRALFYYLAEAVGGNGDKTKPLLLWLNGGPGCSSLGYGAMEELGPFR---VMSDGK--TLYSNPYSWNHAANVLFLESPAGVGYSYSNTTADYGRSGDNGTAEDAYQF 214          
The following BLAST results are available for this feature:
BLAST of CF836106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
SCP32_ARATH8.111e-1844.95Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
YSS2_CAEEL1.384e-1740.52Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
CBPY_PICPG1.384e-1741.00Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]
SCP27_ARATH2.360e-1744.64Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
CBPY_SCHPO3.082e-1742.39Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]
SCP43_ARATH4.026e-1740.80Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
HNLS_SORBI4.026e-1738.64P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP28_ARATH5.258e-1742.73Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
PPGB_MOUSE5.258e-1737.07Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
CBP23_HORVU5.258e-1739.55Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836106 ID=CF836106; Name=CF836106; organism=Citrus sinensis; type=EST; length=569bp
TGAAGATTGTTCCCTAGTTGTTTCTCAAAGAAACTGGTTGGTTAAGACTT
AACATGCTGGAAAAGCCGAAAACAAACGCCAATGGACAAGCTTTGTTTTC
CTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGCATGCAGCTTGCAGCT
TCTTACTCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCCTT
TGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACAGC
TCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTCTC
TTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTTGC
TTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAGCT
TGCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCATA
TTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACCCC
ACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCAAT
TTTCTTCGAAAGTGGCTAT
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